Erythrobacter mangrovi: HQR01_04955
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Entry
HQR01_04955 CDS
T06812
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
emv
Erythrobacter mangrovi
Brite
KEGG Orthology (KO) [BR:
emv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
emv03016
]
HQR01_04955
Enzymes [BR:
emv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HQR01_04955
Transfer RNA biogenesis [BR:
emv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HQR01_04955
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QKG70768
UniProt:
A0A7D4CLM0
LinkDB
All DBs
Position
955307..955924
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AA seq
205 aa
AA seq
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MAVHFHEEDLPAGVLAEGPIAVDTETMGLITARDRLCVVQLSDGNGDEHLVRFGPDSKFD
APNLKAVLADPNRLKLYHFARFDLAAIEHYLGVMATPCYCTKIASKLVRTYTDRHGLKNL
IEELLGGTISKAQQSSDWGGPEITEPQREYAASDVRYLHRLKEELDRRLVREGRMAIAQA
CFEFLPTRARLDLAGWPEHDIFSHM
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcattttcacgaagaagacttgccggcaggcgtgctggcggaaggacccatc
gcggtcgataccgaaaccatggggcttattaccgcccgcgaccggctgtgcgtggtgcag
ttgagcgacggcaatggcgacgaacatctcgtccgcttcggcccggacagcaaatttgac
gcgcccaacctgaaggcggtgttggcagacccgaatcgcctcaagctctaccactttgca
cgcttcgatctcgcggcgatcgagcactatctcggggtgatggccactccctgctattgc
accaagatcgccagcaagctggtgcgtacctataccgatcgccacggcctcaagaacctg
atcgaggaattgctcggcgggaccatttccaaggcccagcagtcgagcgactggggcggc
cccgagattaccgaaccgcagcgggaatacgccgccagcgacgtgcgctatctccatcgg
ctcaaggaagagctcgaccggaggctggtgcgcgaagggcgcatggccattgcccaggct
tgcttcgaattccttcccacccgcgcgcggctcgacctggccggctggcccgagcacgac
atcttcagccacatgtag
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