Erythrobacter mangrovi: HQR01_08060
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Entry
HQR01_08060 CDS
T06812
Name
(GenBank) RNA polymerase sigma factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
emv
Erythrobacter mangrovi
Brite
KEGG Orthology (KO) [BR:
emv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emv03021
]
HQR01_08060
Transcription machinery [BR:
emv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HQR01_08060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
PhyR_sigma-like
Sigma70_r4
Sigma70_ECF
HTH_Tnp_ISL3
KORA
HTH_23
DUF134
HTH_1
Motif
Other DBs
NCBI-ProteinID:
QKG71328
UniProt:
A0A7D4CMH8
LinkDB
All DBs
Position
1558496..1559062
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AA seq
188 aa
AA seq
DB search
MAAVDDTSNAALIGRAIAGDKRAFTTLVEHEIARLIALATRMLGSPSQAEDVVQDGLASV
WLTRHRLDPSKPIGPYLTTIVLNKCRDKLRRRKVAGFLGLPSGREADAVADDAPNPENVA
GAREQLRLVQVEIGRLPVRLQEALVLVTVEGYSQAEAAELLGTTEKAVETRIYRARNRLK
ERFENFEG
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
ttggcagcggtggatgacacttcgaacgcagcgctgatcgggcgggcaatagccggtgac
aagcgggcgttcacaactctcgtcgaacatgagatcgcccggttgatcgcgcttgccacg
cgtatgctgggttcaccatcgcaggccgaagatgtcgtccaggacggtctcgcttcggtc
tggctgacacggcatcgcctcgacccgagcaagcccatcggtccctatttgacgacaatc
gttctcaacaagtgccgcgacaagcttcgccggaggaaagttgcgggcttccttggcttg
ccgagcggccgggaagccgacgccgttgccgacgatgcccctaatcccgaaaatgttgcc
ggagcccgcgaacagctgcggctggtccaggtcgaaatcgggcgcttgccggtgcggctg
caagaggcgctcgtgctggtcactgtcgaggggtacagccaggccgaggctgccgagctg
ctcggcaccacggagaaggccgtcgagacgcgcatctatcgcgcgcgcaaccggctgaag
gagcggttcgaaaactttgaggggtag
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