Sinorhizobium mexicanum: FKV68_00180
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Entry
FKV68_00180 CDS
T06706
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
emx
Sinorhizobium mexicanum
Brite
KEGG Orthology (KO) [BR:
emx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emx03400
]
FKV68_00180 (addB)
Enzymes [BR:
emx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FKV68_00180 (addB)
DNA repair and recombination proteins [BR:
emx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FKV68_00180 (addB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
DUF7280
Motif
Other DBs
NCBI-ProteinID:
QLL59970
UniProt:
A0A859QFU3
LinkDB
All DBs
Position
complement(38076..41252)
Genome browser
AA seq
1058 aa
AA seq
DB search
MPGHAPNVFTIPAGLPFLRTLARKLCDGGLVPDFSYDPADPLMLAGVTIFVPTRRSARVL
RSEFVDLLGGRSAILPTIRALGETDDDSGFFDAEMPAILDLAPPLSGTARLIELGRLILA
WRNQLPQAVLDIHGESPLIAPASPADAIWLARNLAELIDAVETEELDWEALDGLDAGEHA
LWWQLTLAFLKIARTYWPERLDELKQSSPSRHRNAILQAETQRIAAGRVTGPIIIAGSTG
SIPVTAALIAAVSRLPNGTIVLPGLDQTMSDTEWELIVGDGSTGITRDPASRSHPQYGFY
RLLKRMGIGRRDVLTLEPSDGALDYRGMVLSRALLPAKATDSWTRTREDFDPARLLSAFA
DVALIETANEREEATAIAIALRLALADDDESQAALITPDRGLARRVGAELARFGIEADDS
AGTPLAATAAGAVVRLLLEAALRPGDPVPLVALLKHPLARFGETTDDVRRTADALELLAL
RGGTGSADISALGPVVEQALEKQKHDRHPPPWQSRLDEADIAAARRLAARIALASEPLAS
ASVLRVDGQHRSKVLTLADWAERTGRALEAVCVDERGSLGDLWSTEAGETLAALLKGIIE
TEGQMHADGPQWCDIVEALAASEAVKPRSMRHPRVFIFGALESRLQSMDLVVLGGMNEGT
WPGQTSNDPFLSRTMKSGIGLEPPERRIGQLAHDFQMACGTRRLILSRSMRQGSAPTVAS
RWLQRLQALGGDRLTQLINSNGADYLHWARILDAGETQPLATRPEPRPPAELQPRKYSFS
EVTRLRRDPYAVYARRILRLQPIEPFNRDPGAAERGTLYHRIVDRFVKGGFDPASPDAET
VMTRLLNEAFDEEALPPHIDTIWRPRFAAVGKAFLGWERDRRKSIAKSFTEVPASMDIGL
ADIRLTGVADRLDRRLDGTIDIIDYKTGSSPSPKEARSLLDPQLSLEAAALKAGAFGATG
CAEPNALLYVRLKPGNRFSVDPVNNEGGRQKETKSADQLAEESLTELRKLLAALMSGRHG
FVSRLIVQKERDYGGEYDHLARVAEWATAEGEDDADEG
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgcccggccacgccccgaacgtctttactatccccgccggcctgccgttcctgaggacg
ttggcgcggaagctctgcgacggcgggctggttccggatttcagctacgatccggcggat
ccgctgatgcttgccggcgtgacgatcttcgttcccacacgacgctcggcgcgcgtgctt
cgctcggagttcgtcgatctgctcggcggtcgctcggccatcctgccgacgatccgcgcg
ctcggcgagacggatgacgacagcggctttttcgatgccgagatgccggcgatactcgat
ctcgccccgcctctttccggcaccgcacgcctgatcgaactcggccgcctcattctcgcc
tggcgcaaccagctgccgcaggccgttctcgatatccacggcgaaagtccgctgatcgcg
ccggcaagcccagccgatgccatttggctcgcgcgcaatctcgccgagctgatcgacgcc
gtcgaaaccgaggagctcgactgggaggccctcgatggactcgacgccggcgaacatgcg
ctctggtggcagttgacgcttgccttcctgaagatcgcccgcacctattggccggagcgg
ctggacgagctcaagcaatcttcgccttcgcgccaccgcaacgccattctgcaggcggaa
acacagcgcatagccgccggcagggtgactggccctatcatcatcgccggctcgaccggc
tcgatccccgtgacagccgcgctgatcgcagccgtgagcaggctgccgaacggcaccatc
gttctgccgggcctcgatcagacgatgagcgatacggaatgggagctgatcgtcggcgat
ggctcgaccggcatcacaagggatccggcgagccgcagccacccgcaatacggcttctac
cggctgctgaaacgcatgggcatcggtcggcgtgatgtcctgacactcgagccgtccgat
ggcgccctcgactatcgcggcatggttctctctcgcgccctgcttccggcaaaggcgacc
gacagttggacccggacgcgtgaggatttcgatccggcgaggcttctctcggcctttgcc
gacgtcgcgctgattgagacggccaatgagcgggaagaggcaacggctatcgccatcgca
ctgaggctcgcgcttgccgacgacgatgaaagccaggcggcgttgatcacgcccgatcgg
gggcttgcgcgccgcgtcggggcggaacttgcccgtttcggcatcgaggccgacgattcc
gccggcacgccgctcgcggccacagccgccggcgccgtcgtacgcttgttgctggaggcc
gcattgcggccgggcgatcccgtgccgctggtggctctcctcaagcatccgctcgcccgc
ttcggtgagacaaccgacgatgtccggcggacggccgacgcgctcgagctgctggcgttg
cgcggcggcaccggcagcgccgacatttcggcccttggcccggtggtcgagcaggcgctc
gaaaagcaaaagcatgatcgtcatccgcccccgtggcagagccgcctcgatgaggcggat
atagccgccgcccgcaggcttgccgcacgcattgcgttggcctccgaacccctggcgagc
gcgtccgtgcttcgcgtcgacggccagcatcgatccaaggtgctcacccttgccgactgg
gcggagcgaacgggtcgcgcactggaagccgtttgcgtcgacgagcgcggcagccttggc
gatctctggtcaacggaagccggcgaaacactggcagcgcttctcaaaggtatcatcgag
acggaaggtcagatgcacgccgacggaccgcagtggtgcgacatcgtcgaggcgctcgcg
gcgagcgaggcggtcaagccccgatcgatgcggcatccccgcgtcttcatcttcggggcg
ctggaatcgcgcctgcaaagcatggatctcgtggtgctcggcggtatgaacgagggcacg
tggccagggcagacgtcaaacgaccccttcctgtcgcggacgatgaaatccggaatcggc
ctcgaaccgccggagcggcgtatcggccagctcgcccacgatttccagatggcctgcggc
acgcgccgcctgatcctctcgcgttccatgcgccagggctcggcaccaacggtcgcttcg
aggtggctgcagcgcctgcaggcgctcggcggcgatagactgacgcaactcatcaactcc
aacggcgcggactatttgcactgggcgcgcattctcgatgcaggcgaaacccagccgctt
gcgacgcggccggaaccgcggccgccggccgagctgcagccgcgcaaatattcgttcagc
gaagtgacccgcctccgtcgcgatccctacgccgtctacgctcggcggatcctgcggctg
cagccgatcgagccgttcaatcgtgatccgggggcggccgagcgcggaacgctctaccat
cgaatagtcgaccgcttcgtcaagggcggcttcgatccggcctcgcccgatgcggaaacg
gtgatgacgcgactgctcaacgaagccttcgacgaggaggcgcttccgccgcatatcgac
acgatctggcgtccgcgttttgccgctgtcgggaaggcattccttggctgggagcgcgac
cgccggaagagtatcgcgaagtctttcaccgaggttcccgcatccatggatatcggcctt
gcggatattcggctgaccggcgttgccgaccgcctcgatcggcgcctggacggcaccatc
gacatcatcgactacaagaccggctccagcccctcgcccaaggaggcgcgtagtctgctc
gacccgcagctttcgctcgaggccgccgcgctcaaggccggagccttcggcgcgacggga
tgcgccgaaccaaatgcgcttctctatgtccgcctgaaacccggaaaccgcttcagcgtc
gatcccgtcaacaacgagggtggcaggcaaaaggaaacgaaatccgcggaccagctggcg
gaagaatcgctcaccgaattgcggaagctgctcgcggcactgatgagcggccgccacggc
ttcgtttcccgcctgatcgtgcagaaggagcgcgactacggcggcgaatacgatcatctg
gcgcgggttgccgaatgggcgactgccgaaggcgaggatgatgccgatgagggatga
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