Sinorhizobium mexicanum: FKV68_01175
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Entry
FKV68_01175 CDS
T06706
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
emx
Sinorhizobium mexicanum
Pathway
emx03030
DNA replication
emx03410
Base excision repair
emx03420
Nucleotide excision repair
emx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
emx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FKV68_01175 (polA)
03410 Base excision repair
FKV68_01175 (polA)
03420 Nucleotide excision repair
FKV68_01175 (polA)
03440 Homologous recombination
FKV68_01175 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emx03032
]
FKV68_01175 (polA)
03400 DNA repair and recombination proteins [BR:
emx03400
]
FKV68_01175 (polA)
Enzymes [BR:
emx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FKV68_01175 (polA)
DNA replication proteins [BR:
emx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FKV68_01175 (polA)
DNA repair and recombination proteins [BR:
emx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FKV68_01175 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FKV68_01175 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
Taq-exonuc
IMS_HHH
HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
QLL60147
UniProt:
A0A859QHV4
LinkDB
All DBs
Position
260427..263441
Genome browser
AA seq
1004 aa
AA seq
DB search
MKNGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVAGFCNMLWKLLTDARDTSVGVA
PTHFAVIFDYSSKTFRNVLYDQYKANRTAPPEDLIPQFGLIRHATRAFNLPCIEKEGYEA
DDLIATYARLAEEAGAGVTIVSSDKDLMQLVTSRVSMYDSMKDKQITIPDVIEKWGVPPE
KMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLETLLARAGEIKQQKRRENIIANA
ELARLSRELVTLKKDTPLDVPLEELRLEPQNGPKLIAFLKTMEFNTLTRRVAAATDTDAE
AVEAAHVPIEWGIEAHGPDLDTGEAAGPPPSTQSSSAAPPRGTAAKAAVSFLSNGQDADT
TGATPQGLARARAEIFAKASFDRSGYVAIRDLATLDRWIADARDAGVVGFDAAATSLDAM
QADLVGFSLAIADYGDNPSGTKIRAAYVPLIHKNGAGDLLGGGLLENQVPVREALSRLKT
LLEDPSVLKVAQNLKFDYLLMKRHGITMQSFDDTMLMSYVIDAGNGAHGMDSLSERWLNH
KPTAYKDITGSGRSSLTFDFVDVDRATAYVAEEADVTLRLWHVLKPQLASKGLTRVYERL
ERPLVGVLAHMEERGITVDRQILSRLSGELAQGAAALEDEIYRLAGETFTIGSPKQLGDI
LFGKMGLPGGSKTKTGQWSTSAQVLEELAAEGHDLPRKIVDWRQLTKLKSTYTDALPGFV
HPQTRRVHTSYALAATTTGRLSSADPNLQNIPVRTAEGRKIRTAFIATPGHKLVSADYSQ
IELRVLAHVADIPQLRQAFADGVDIHAMTASEMFGVPVDGMPGEIRRRAKAINFGIIYGI
SAFGLANQLSIERSEASEYIKKYFERFPGIRDYMENTKAFAREHGYVETIFGRRAHYPDI
RSSNPSHRAFNERASINAPIQGSAADIIRRAMVKMEPALGEAKLSARMLLQVHDELIFEV
EDGETERTIPVIVSVMENAAMPALNMKVPLKVDARAAHNWEEAH
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacggtgatcacctcttcctcgtcgacggttccggcttcatcttccgggccttc
catgccatcccgccgctcaaccgcaagtccgacggtcttccggtcaatgcggttgccggc
ttctgcaacatgctctggaagctgctgactgacgcgcgcgatacgtcggtcggcgtggca
ccgacgcatttcgcggtgatcttcgactattcctcgaagaccttccgcaacgtgctttac
gaccagtacaaggcgaatcgcactgcgccgcccgaagatctgatcccgcagttcgggctg
atccggcatgccacccgcgccttcaacctgccttgcatcgagaaggaaggctatgaggcg
gacgacctgattgcgacctacgcccgccttgccgaagaggcgggcgccggtgtcacgatc
gtttcctcggacaaggacctgatgcagctggtaacgtccagggtgtcgatgtacgacagc
atgaaggacaagcagatcacgatccccgacgtgatcgaaaaatggggcgtgccgccggag
aagatgatcgatctccaggcgatgaccggcgattcgaccgataacgtgccggggattccc
ggcatcggaccgaaaaccgcagcgcaattgctcgaagaatacggcgacctcgagacgttg
cttgcgcgcgccggcgaaatcaagcagcagaagcggcgcgagaacattatcgccaatgcc
gagcttgcgcgcctttcccgcgaactcgtgaccctgaagaaggatacgcctctcgacgtt
ccgctcgaagagctgagactcgagccgcaaaacggcccgaagctcatcgctttcttgaag
accatggaattcaacacgctgacgcgccgtgtcgcagcggcgacggatacggacgctgag
gctgtcgaagcggcgcatgtgccgatcgaatggggcatagaagcgcacggaccggatctc
gataccggcgaggcggccggcccgccgccttccacgcaatcgtcgagcgctgcaccgccg
cgcggaacggcggccaaggcggccgtttccttcctctcgaacggccaggatgcagacacc
acaggcgcgacaccgcagggtctggcgcgggcgcgtgcagaaatctttgccaaggcttct
ttcgatcgctccggttatgtcgcgatccgcgatcttgcgacgcttgaccggtggatcgcc
gatgcgcgcgatgccggcgtcgttggcttcgacgctgcagcgacatcgctcgacgccatg
caggcggatctggtcggcttctcgctggcgatcgccgattacggtgacaacccctccggc
acgaagatccgggcggcctacgtgccgctgatccacaagaatggcgctggcgatctgctt
ggcggcggtctcctcgaaaatcaggtccccgtccgcgaggcgctgagccggctaaagaca
ttgctcgaggatccgtcggtattgaaggtcgcccagaacctgaaattcgactatctcctg
atgaagcggcatggcatcaccatgcaaagcttcgacgacaccatgttgatgtcctatgtc
atcgatgccggcaacggtgctcatggcatggattccctgtccgagcgatggctcaaccac
aagcccacggcctacaaggacatcaccggcagcggccggtcttcgcttacattcgacttc
gtcgatgtcgaccgggcgactgcctatgtggcggaagaggccgacgtgacgctgcgtctc
tggcacgtcctgaaaccgcaacttgcctccaagggcctcactcgcgtctacgagcgactt
gagagaccgctggtcggtgtccttgcccatatggaggagcgcggcatcaccgtcgatcgc
caaattctctcgcgcctctcgggagagcttgcgcagggcgcggcggcgctcgaagacgaa
atctatcgcctggccggggaaaccttcacgatcggctcgccgaagcaactcggcgacatt
ctcttcggcaagatgggattgccagggggatcgaaaaccaagaccggccaatggtcgact
tcggcgcaggttctcgaggagcttgccgccgagggtcatgacctgccgcgcaagatcgtc
gattggcgccagctcaccaagctgaaatccacctacaccgacgccctgccgggcttcgta
cacccgcaaacacggcgcgtgcatacgtcctatgctttggcggcgacgaccacgggccgc
ctctcctcggccgaccccaacctgcagaacattccggtcaggaccgccgagggccgcaag
atccgcacggccttcatcgcgacgccgggacacaagctggtttcggcggactacagccag
atcgagcttcgggtgctggcgcatgtggcggatattccgcaactccgccaggccttcgcc
gacggcgtcgacatccacgcgatgactgcttccgagatgttcggggttcccgtcgacggc
atgccaggcgaaatccgccgtcgcgccaaggcgatcaatttcggcatcatctacggcatc
tccgccttcgggcttgccaatcagctttcgatcgagcgttcggaggccagtgaatacatc
aagaagtatttcgagcgcttccctggcatccgcgactatatggagaacaccaaggccttc
gctcgcgagcacggctatgtcgaaacgatctttggccgccgtgcccactatcccgatatc
cgctcctccaacccgtcgcatcgcgccttcaacgaacgcgcgtcgatcaatgcgccgatc
cagggctctgccgccgacatcatccgccgcgccatggtgaagatggagccggcgctgggc
gaggcgaagctgtccgcgcgcatgctgcttcaggtccacgatgaattgatcttcgaggtc
gaggacggcgaaaccgaacgcaccattccggtgatcgtctcggtgatggaaaacgctgcc
atgccggcgctcaacatgaaggtgccgctgaaggtcgacgcccgcgccgcgcacaactgg
gaagaggcgcattga
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