KEGG   Sinorhizobium mexicanum: FKV68_03145
Entry
FKV68_03145       CDS       T06706                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
emx  Sinorhizobium mexicanum
Brite
KEGG Orthology (KO) [BR:emx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:emx03400]
    FKV68_03145
Enzymes [BR:emx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FKV68_03145
    5.6.2.6  RNA 3'-5' helicase
     FKV68_03145
DNA repair and recombination proteins [BR:emx03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FKV68_03145
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 PSD4 MRB1590_C
Other DBs
NCBI-ProteinID: QLL60509
UniProt: A0A859QMK5
LinkDB
Position
complement(668028..670580)
AA seq 850 aa
MFPVNRIDSPLPESDALTLPAPFLRWFAEKGWRPRAHQLELLSRAEAGESTLLIAPTGAG
KTLAGFLPSLVALTRRGKIPPGSPFIGIHTLYISPLKALAVDIERNLMKPVSEMGLSVRI
ENRTGDTPQGKRQRQRLNPPDILLTTPEQLALLIANGEAERFFKDLRYVVLDELHSLVTS
KRGHLLSLGLARLRRLAPDLQTIGLSATVAEPMDLQRWLVAQSEERENHAGLITVSGGAK
PEISILRTDEHVPWAGHSARYAIADVYATIKDHGTTLLFVNTRSQAEMLFQELWKINDDN
LAIALHHGSLDVAQRRRVEAAMSENRLRAVVATSTLDLGIDWGDVDLVVHVGAPKGASRL
AQRIGRANHRMDEPSRAILVPANRFEVMECQAALDANYVGAQDTPPVGRGALDVLAQHIL
GVACAKPFDVLDLHREITSAAPYADLSWETFERIVDFVATGGYALRTYERYARIRKTKDG
LWRVSNPMVAQQYRLNVGTIVESPMLNVRMVKRNARRSLGRGGMTLGKVEEYFLEMLSPG
DTFLFSGKVVRFEGIRENECLVSQAFSFDPKVPTYAGGKFPLSTYLAAQVRKMLADAARR
ASLPDQVRDWLALQKDVSVLPREDELLIETFPRGSRHYMVIYAFEGRLAHQTLGMLLTRR
LDRAGLKPLGFVATDYSLAVWGLDDLSSAFRARRPSLAQLFDEDMLGDDLEAWLNESFLL
KRTFRNCAVVAGLIDQRHPGKEKTGRQITVSADLIYDVLRAHEPDHILLEATRNDAATGL
LDIGRLGSMLNRIKGHITHRRLDHISPLAIPVMLEIGREAVQGEAHDFLLSEAADDLINE
AMGGSQDADE
NT seq 2553 nt   +upstreamnt  +downstreamnt
ttgttccccgtgaacaggatcgattctccattgccggaaagcgacgcgctgacgttgccg
gcgccgtttctccggtggttcgccgagaagggctggcgaccccgcgcccaccagctcgag
ctgctgtcccgtgcggaggcgggagaaagcacgcttctgatcgcaccgaccggtgcgggc
aagacgcttgccggatttctgccgtcgctggtcgcgcttacccgacgcggcaagatccca
ccaggctcacccttcatcggcattcacaccctctacatatcgccgctgaaggcgctcgcg
gttgacatcgagcgcaacctgatgaagcccgtctccgagatgggcctgtcggtcaggatc
gagaaccggacgggcgacacgccgcagggcaagcgacagcgccagaggctcaatccgccc
gatatcctgctgaccacgcctgagcagctggctctcctcatcgccaatggcgaagcggag
cgcttcttcaaggatctgcgctacgtcgtgctcgacgagctgcactcgctggtgacctca
aaacgcgggcatctgctctcgctcggtcttgcacgactgcgccggctcgcacccgacctt
cagacgatcggcctttccgcaaccgtcgccgagccaatggacctgcagcgctggctcgtg
gcccagagcgaagaacgggagaaccacgccggactgattaccgtttccggcggcgcgaag
ccggaaatttcgatcctgcgcaccgacgagcacgtgccctgggccggacattcggcgcgt
tatgcgatcgccgacgtctatgccacgatcaaggatcacggcacgacgctgcttttcgtc
aacacccgcagccaggcggaaatgctgttccaggagctctggaagatcaacgacgacaac
ctggcgatcgcgcttcatcatggttcgctcgatgtcgcgcagcgccgcagggtggaggcg
gccatgtcggaaaaccggctgcgcgccgtcgtcgccacctcgacgctcgatctcggtatc
gactggggcgatgtcgatctggtggtccatgtcggtgcaccgaagggggcgagccgcctt
gcccagcgtatcggccgagccaatcaccgcatggacgagcccagccgggcgatcctcgtg
cctgccaaccgcttcgaagtgatggaatgccaggcggcgctcgacgccaactatgtcggc
gcgcaggatacgccgcccgttggccgaggcgcactcgacgtgctcgcccaacatatcctg
ggagttgcctgcgcgaagcccttcgatgtcctcgatcttcatcgcgaaatcaccagcgcg
gcaccctacgcggacctttcctgggagactttcgagcgcatcgtcgatttcgtcgccacc
ggcggctatgcgcttcgcacctacgagcgctacgcccgcatccgcaagactaaagacggg
ctctggcgggtatcgaacccgatggtcgcccagcaataccgcctcaatgtcggaaccatc
gtcgaatccccgatgctgaacgtgcgcatggtcaagcgcaacgcgcgccgctcgcttggc
cgcggcggcatgacgctcggcaaggtggaggaatatttcctcgaaatgctgtcgccgggc
gacacattcctcttttccggcaaggtggtccgcttcgagggaatccgcgagaacgagtgc
ctcgtctctcaggccttttccttcgacccgaaggtgccgacctatgccggcggcaaattt
ccactttccacatacctcgcggcgcaagttcgcaagatgcttgccgatgccgcgcgccgc
gcctcgttacccgaccaggtgcgtgactggctggcgctgcagaaggacgtctcggtgctg
ccgcgcgaggacgagctgctgatcgaaaccttcccgcgcggcagtcgtcattacatggtg
atctacgccttcgaagggcggctcgcccaccagacgctcggcatgctcttgacccgccgc
ctcgaccgcgccggcttgaaaccgctcggcttcgtcgccaccgactactcgctcgccgtc
tgggggctcgacgatctcagcagcgccttccgggcccgtcgcccgtcgctcgcgcagctc
ttcgacgaagacatgctcggcgacgacctcgaggcctggctgaacgagtccttccttttg
aaacgcaccttccgcaactgcgccgtcgtcgccggattgatcgaccagcgccatccgggc
aaggaaaagaccgggcggcagattaccgtttcggccgatctcatttacgacgtattgcgg
gcgcacgagccggaccacatcctgcttgaggcaacgcgcaacgacgccgcgacgggactt
ctggacatcggccggctcgggtctatgctcaaccgaatcaaggggcacatcacccacaga
cggctcgatcatatctcaccgctcgccatacccgtgatgctggagatcgggagggaagcg
gtccagggagaggcgcacgacttcctgctctcggaagcggccgacgacctgatcaacgaa
gcgatgggcggcagccaagatgccgatgagtag

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