Sinorhizobium mexicanum: FKV68_06985
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Entry
FKV68_06985 CDS
T06706
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
emx
Sinorhizobium mexicanum
Brite
KEGG Orthology (KO) [BR:
emx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emx03032
]
FKV68_06985 (topA)
03400 DNA repair and recombination proteins [BR:
emx03400
]
FKV68_06985 (topA)
Enzymes [BR:
emx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FKV68_06985 (topA)
DNA replication proteins [BR:
emx03032
]
Prokaryotic type
DNA Topoisomerases
FKV68_06985 (topA)
DNA repair and recombination proteins [BR:
emx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FKV68_06985 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Peptidase_M35
Motif
Other DBs
NCBI-ProteinID:
QLL61213
UniProt:
A0A859QBZ5
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Position
complement(1471443..1474118)
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AA seq
891 aa
AA seq
DB search
MNVVVVESPSKAKTINKYLGPGYKVLASFGHVRDLPAKDGSVRPDEDFEMSWEVDGASAK
RMKDIADAVKSSDGLILATDPDREGEAISWHVLDLLKKKKVIGDKPVRRVVFNAITKKAV
LDAMAEPRDIDISLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR
EAEIERFVTEEYWNISALLKTPRGDEFEARLVSADGKRLQPRAIGNGDEANRLKALLDGA
SYVVESVEAKPVKRNPAPPFTTSTLQQAASSKLGFSASRTMQVAQKLYEGVDIGGETVGL
ITYMRTDGVQMAPEAIDAARRAIGSQFGERYLPEKPRFYSTKAKNAQEAHEAIRPTDFNR
TPDQVRRFLDGDMLKLYDLVWKRGIASQMASAEIERTTAEIIADNGGKKAGLRATGSVIR
FDGFIAAYTDMKEDGEQADDGDEGGRLPEINARENLAKQKINATQHFTEPPPRYSEATLI
KKMEELGIGRPSTYAATVTTLLDRDYVTNDKRKLVPQAKGRLVTAFLESFFTRYVEYDFT
ASLEEKLDQISAGDLNWKDVLREFWKDFFSQIEDTKELRVTNVLDALNEELAPLVFPKRE
DGSDPRICQVCGTGKLSLKLGKYGAFVGCSNYPECNYTRQLSSETNGDAEASVSNEPLSL
GKDPHTGEEITLRSGRFGPYVQRGEGKDAKRSSLPKGWTPASIDHEKAIALLSLPRDIGA
HPETGKMISTGLGRYGPFVLHNGTYANLDSIEDVFAIGLNRAVSVLADKQSKGANGSRGR
TAAAALKELGEHPDGGAITVRDGRFGPYVNWGKVNATLPKGKDPQSVTVEEALALIAERA
AKGGATKGKATKAKSTTAKAAKTASNGAAKLAKPKTAAKAKAKTAAKAKKD
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgtagtggtggaatcgccttccaaggccaagacgatcaacaagtacctgggc
cccggctataaggtgcttgcttcgttcggccacgtgcgggacctgccggccaaggatgga
tcggtgcgcccggacgaagacttcgagatgtcctgggaggtcgacggcgcttcagcgaaa
cgcatgaaggacatcgccgacgccgtaaaatcgtcggacggcctgattctcgcaaccgac
ccggatcgcgagggcgaggcaatctcctggcatgtgctggaccttctcaagaagaagaag
gtcatcggcgacaagccggtgaggcgcgttgtcttcaacgcgatcacgaaaaaggccgtg
ctcgatgcaatggccgagcctcgcgatatcgatatctcgctggttgacgcctatctcgcc
cgccgcgccctcgactatctcgtcggcttcaacctttcccccgtcctctggcgcaaattg
ccgggggcgcgttcggccggccgtgtgcaatcggtggctctgcgtctcgtctgcgatcgc
gaagcggaaatcgaacgtttcgtcacggaggaatactggaatatttcggcgcttctgaag
acgccgcgcggcgacgaattcgaagcgcgtctcgtctccgccgacggcaagcggctgcaa
ccaagagcaatcggcaatggtgacgaggccaaccggctgaaagcgctgctcgatggcgcg
agctatgtggtcgagagcgtcgaagcaaagccggtcaagcgcaatccggcgccgcccttc
accacctcgacgctgcagcaggccgcctcttccaagctcgggttttccgcctcgcgcacg
atgcaggtggcgcagaagctttacgagggcgttgacatcggtggcgagacggttggtctc
atcacctatatgcgtaccgatggcgtgcagatggccccggaggcaatcgacgccgcccgc
cgggcgatcggcagccagttcggcgaacggtatctgccggaaaagccccgcttctattcc
accaaggcgaaaaacgctcaggaagcacacgaagccatccgtccgacggatttcaaccgc
acacccgaccaggttcgccgcttcctcgacggcgacatgctcaaactttacgatctcgtc
tggaagcgtggtatcgcgagccagatggcttcggccgaaatcgagcgtacgaccgccgag
atcatcgccgacaacggcggcaagaaggccggcctcagggccaccggttcggtgatccgt
ttcgacggcttcatcgccgcctacaccgacatgaaggaagatggtgagcaggccgatgac
ggtgacgagggcggtcggctgccggagatcaacgcgcgggagaatctcgccaagcagaag
atcaacgccacccagcatttcaccgagccgccgccgcgctactcggaagcgacgctgatc
aagaagatggaagaactcggcatcggccgtccgtcgacctatgccgcaaccgtcacgacc
ctcctcgaccgggactatgtgacgaacgacaagcgaaagctggtgccccaggccaagggc
cgtctcgtaactgccttcctggagagcttcttcacgcgttatgtggaatatgatttcacg
gcgtcgctggaggagaagctcgatcagatttccgccggcgacctcaactggaaggacgtc
ctgcgcgagttctggaaggacttcttctcccagatcgaagataccaaggaactgcgcgtc
accaacgtgctcgatgccctcaacgaggaactggcgccgctcgtcttcccgaagcgtgag
gacggcagcgatccgcgtatctgccaggtctgcgggaccgggaaactctcgctgaagctc
ggaaaatacggtgcgttcgtcggctgctccaattacccggagtgcaactacacgcgccag
ctttcctccgaaaccaacggcgatgcggaagcgtcggtatcgaacgagccgctgagcctc
ggcaaggatccgcatactggcgaggaaatcactttgcgcagcggccgcttcggaccctat
gtccaacgcggcgaaggtaaggacgcaaagcgctcgagcctgccgaagggctggacgccg
gcatcgatcgaccatgaaaaggccatcgcgctgctgtcgctgccgcgcgacatcggcgcg
catccggaaaccggcaagatgatctccaccggtctcgggcgctacggacccttcgtgctc
cacaacggcacctacgccaacctggactcgatcgaggatgtcttcgcgatcgggcttaac
cgcgcagtttcggtgctcgcggacaagcagtcgaagggcgccaacggctcccgcggacgt
accgccgcggccgcactcaaggaactcggcgaacatcccgacggaggcgcgatcaccgtg
cgcgacgggcggttcggtccctatgtcaactggggcaaggtcaacgccacgctgcccaag
ggcaaggatccgcaatccgtgacggtcgaagaggcgctggcgcttattgccgaacgtgcg
gccaagggcggcgcgacaaaaggcaaggcgaccaaagcgaagtcgacgacggcaaaggcc
gccaagaccgcttcgaacggcgcggcaaaactcgccaagccgaagaccgccgccaaggca
aaagcgaaaacggccgcgaaggccaagaaggactga
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