Sinorhizobium mexicanum: FKV68_07250
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Entry
FKV68_07250 CDS
T06706
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
emx
Sinorhizobium mexicanum
Pathway
emx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
emx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FKV68_07250 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emx03021
]
FKV68_07250 (rpoB)
03400 DNA repair and recombination proteins [BR:
emx03400
]
FKV68_07250 (rpoB)
Enzymes [BR:
emx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FKV68_07250 (rpoB)
Transcription machinery [BR:
emx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FKV68_07250 (rpoB)
DNA repair and recombination proteins [BR:
emx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FKV68_07250 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
QLL61258
UniProt:
A0A859QVF5
LinkDB
All DBs
Position
1518251..1522393
Genome browser
AA seq
1380 aa
AA seq
DB search
MAQTLSFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVEEPKGGRPDEGLQAVFK
SVFPIKDFSGASMLEFVSYEFEPPKFDVEECRQRDLTYAAPLKVTLRLIVFDIDEDTGAK
SIKDIKEQNVYMGDMPLMTDNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLF
AARVIPYRGSWLDIEFDAKDIVHARIDRRRKLPVTSLLMALGMDGEEILDTFYTKSLYQR
DGEGWRVPFQPDALKGQKAITDMIDADTGEVVVEAGKKLTPRLLRQLQEKGLKALKATDD
DLYGNYLAEDVVNYGTGEIYLEAGDEIDEKTLPVILSAGFDEIPVLDIDHINVGAYIRNT
LAADKNENRQDALFDIYRVMRPGEPPTMDSAEAMFNTLFFDAERYDLSAVGRVKMNMRLD
LDVPDTVRTLRKEDILAVVKMLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRLGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQVNPLSEITHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRKIVDGKVTSDVVYLSAMEEAKYHVAQANSPLNGDNSFAEEFVVCRHAGEVMLAPRDNI
NLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRAEAPFVGTGMEPVVAR
DSGAAIAARRGGVVDQVDATRIVIRATEDLDPSKSGVDIYRLQKFQRSNQNTCVNQRPLV
TVGDVLNKGDIIADGPSTDLGDLALGRNALVAFMPWNGYNYEDSILLSERIVRDDVFTSI
HIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQAILDRNVYARLVDMLRGHVAVAGPKGFKKGTELSNAVVSEYPRSQWW
MFAVEDEKAQGEIEALRAQYDESKSRLEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKR
KIQPGDKMAGRHGNKGVVSRIVPIEDMPFLEDGTHVDVVLNPLGVPSRMNVGQILETHLG
WACAGMGKKIGAMLDAYHENGDIAPLRATIDDVIGSGPKGEPIKQYDDESVVRLAEQTRR
GVSIATPVFDGAVEADVNEMLNKAGLKVTGQSTLFDGRTGEPFDRQVTVGYIYMLKLNHL
VDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
AGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLSVELENSKVDDLSTAAQLPDAAE
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccctttcgtttaacggtcgcaggcgcgtacgcaagttttttggtaaaatt
ccagaagtcgcggagatgccgaacctgatcgaggttcagaaggcgtcctacgaccaattt
cttatggttgaagagccgaagggcggacgccccgatgagggccttcaagccgttttcaag
tcggtatttccgatcaaggatttctcgggcgcttccatgctcgaattcgtgtcctacgag
ttcgaaccgccgaagttcgacgttgaagaatgccgccagcgcgacctgacctatgcggcg
ccgctgaaggtaacgctgcgcctgatcgtgttcgatattgacgaggacaccggcgcaaag
tcgatcaaggacatcaaggaacagaacgtctacatgggcgacatgccgctcatgacggac
aacggtaccttcatcgtcaacggcaccgagcgcgtcatcgtttcgcagatgcatcgctcg
ccgggcgtgttcttcgatcacgacaagggcaagagccattcgtccggcaagctgctcttt
gccgcgcgcgtcattccgtatcgcggctcgtggctcgacatcgaattcgacgccaaggac
atcgtgcatgcccgtatcgaccgtcggcgcaagcttccggtgacgtcgctgttgatggcg
ctcggcatggacggcgaggagatcctcgacaccttctacacgaagtcgctctaccagcgc
gacggcgaaggctggcgcgtaccgttccagccggatgccctgaagggccagaaggcgatc
accgacatgatcgacgccgataccggcgaagtcgtcgttgaagccggcaagaagcttacg
ccgcgcctgctccgccagctgcaggagaagggtctgaaggctctcaaggccaccgacgac
gatctctacggcaactaccttgctgaagacgtggtcaactacggaacgggcgagatctat
ctcgaagccggcgacgagatcgacgagaagacgcttcccgtcatcctttcggcaggcttc
gacgagatcccggttctcgacatcgaccacatcaatgtcggtgcctacatccgcaacacg
cttgccgccgacaagaacgagaaccgccaggatgcgctgttcgacatctatcgcgtcatg
cgtccgggcgaaccgccgaccatggattctgccgaagccatgttcaacacgctgttcttc
gatgccgagcgctacgatctttcggctgtcggccgcgttaagatgaacatgcgtctcgac
ctcgacgttccggataccgtccgcacgctccgcaaggaagacatccttgctgtcgtcaag
atgctcgtcgagctgcgtgacggcaagggcgagatcgacgacatcgacaacctcggcaac
cgtcgcgttcgctcggtcggcgagctcatggagaaccagtatcgcctgggcctcctgcgc
atggagcgcgcgatcaaggaacgcatgtcctcgatcgagatcgacacggtcatgccgcag
gatctgatcaacgcgaagccggctgctgccgctgttcgcgagttcttcggctcgtcgcag
ctgtcgcagttcatggaccaggtgaatccgctttcggaaatcacccacaagcgtcgtctt
tcggctcttggcccgggtggtctgacccgcgaacgtgcgggcttcgaagtgcgcgacgtt
cacccgacccattacggccgcatctgcccgatcgaaacgccggaaggcccgaacatcggc
ctgatcaattcgctcgcaaccttcgcccgcgtcaacaagtacggcttcatcgagagcccg
taccgcaagatcgtggacggcaaggtcaccagcgacgtcgtctatctgtcggcgatggaa
gaggcgaaatatcatgtggcgcaggcaaactcgcccttgaacggcgacaactcgttcgct
gaagaattcgtcgtctgccgtcatgccggcgaagttatgctggccccgcgcgacaacatc
aacctgatggacgtttcgccgaagcagctcgtgtcggtcgcggcggctctcatcccgttc
ctcgagaacgacgacgccaaccgcgcactgatgggctcgaacatgcagcgccaggccgtg
ccgctgctcagggcagaagccccgttcgtcggcacgggcatggagccggtcgtcgctcgc
gactccggtgctgcgatcgccgcccgccgtggcggtgtcgtcgaccaggtcgatgcgacg
cgtatcgttatccgcgccaccgaagatctcgatccgtcgaagtccggcgtggatatctat
cgcctgcagaagttccagcgttcgaaccagaacacctgcgtcaaccagcgtccgctggtc
accgtcggtgacgttctgaacaagggcgacatcatcgcggacggtccttcgacagacctc
ggcgatctggcgctcggccgcaatgcgctcgtcgcgttcatgccgtggaacggctacaac
tacgaagactcgatcctgctttccgagcggatcgtgcgcgacgacgtgttcacctccatc
cacatcgaagaattcgaagtgatggcgcgcgacaccaagcttggtccggaagaaatcacc
cgcgacattccgaacgtctcggaagaagcgttgaagaatcttgacgaagccggtatcgtt
tacatcggcgccgaagttcagccgggcgatatcctcgttggcaagatcacgccgaagggc
gaaagcccgatgacgccggaagaaaagcttctgcgcgccatcttcggtgagaaggcctcg
gacgtccgtgacacgtccatgcgcatgccgccgggcaccttcggcacggtcgtcgaagtg
cgcgtcttcaaccgccacggagtggaaaaggacgagcgcgcgatggcgatcgagcgcgag
gaaatcgaacgcctcgccaaggaccgtgacgacgaacaggcgatcctggaccgcaacgtc
tatgcacgtcttgtcgacatgttgcgtggtcacgtcgccgtggctggcccgaagggcttc
aagaagggcaccgagctttcgaacgctgtcgtcagcgaatatccgcgctcgcagtggtgg
atgttcgccgtcgaggacgaaaaggctcagggtgagatcgaagcgctccgcgcccagtac
gacgaatccaagtcgcgccttgaacagcgcttcatggacaaggtcgagaaggtccagcgc
ggcgatgaaatgcccccgggcgtgatgaagatggtcaaggtcttcgtcgcggtgaagcgc
aagatccagccgggcgacaagatggccggccgtcacggcaacaagggtgtcgtgtcgcgc
atcgtgccgatcgaagacatgccgttcctggaagacggtacccatgtcgacgtggtgctg
aacccgctcggcgtgccgtcgcgcatgaacgtcggccagatcctcgaaacccatctcggc
tgggcttgcgccggcatgggcaagaagatcggtgcgatgctggatgcgtaccacgagaac
ggcgatatcgcgccgctccgcgcaacgatcgatgacgtcatcggatccggtccgaagggc
gagccgatcaagcagtacgacgacgagtccgtggttcggcttgccgagcagacccgtcgc
ggcgtatcgatcgcaacgccggtcttcgacggtgctgtcgaggccgacgtgaacgagatg
ctgaacaaggcaggtctcaaggtgaccgggcagtcgacgctcttcgacggccgtaccggc
gaacctttcgaccgtcaggtgaccgtgggctacatctacatgctgaagctcaatcacttg
gtggacgacaagatccacgcccgttcgatcggtccttactcgctcgtcacccagcagccg
ctgggcggcaaggcgcagttcggcggtcagcgtttcggcgaaatggaggtctgggcgctg
gaagcttacggcgccgcctacacgctgcaggaaatgctcacggtcaagtcggacgatgtt
gctggccgcaccaaggtctatgaagcgatcgtccgtggcgacgacaccttcgaggcgggc
attccggagagcttcaacgttctcgtcaaggaaatgcgctcgctgggcctcagcgtcgaa
ctcgaaaactcgaaagtcgacgacctcagcaccgcggcgcaactgccggacgcagcagag
tag
DBGET
integrated database retrieval system
