Sinorhizobium mexicanum: FKV68_14970
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Entry
FKV68_14970 CDS
T06706
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
emx
Sinorhizobium mexicanum
Pathway
emx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FKV68_14970 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emx03019
]
FKV68_14970 (recQ)
03400 DNA repair and recombination proteins [BR:
emx03400
]
FKV68_14970 (recQ)
Enzymes [BR:
emx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FKV68_14970 (recQ)
Messenger RNA biogenesis [BR:
emx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FKV68_14970 (recQ)
DNA repair and recombination proteins [BR:
emx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FKV68_14970 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
HHH
GD_AH_C
Motif
Other DBs
NCBI-ProteinID:
QLL62646
UniProt:
A0A859QQ87
LinkDB
All DBs
Position
complement(3105766..3107688)
Genome browser
AA seq
640 aa
AA seq
DB search
MICIPPAETHTRPPDESDSMPHNDNVSAARLFGAQGASDPLDVLKRVYGYSAFRGQQLDV
VEHVVAGGDAVVLFPTGAGKSLCFQIPALCRNGVGIVVSPLIALMRDQVEALKQLGIRAA
ALNSSLTRDEAITVRRALSAGALDLLYVTPERAVTDGFAEMIGDMDIALFAIDEAHCVSQ
WGHDFRPEYRGLDCLRSRFPGVPRIALTATADPHTRDDIIERLALSGAKVFTTSFDRPNI
AYEIVERDQPRQQLLRFLSRFKGSSGIVYCLSRAKVEDTAEWLNVQGVRALPYHAGMDRV
LRDAHQDAFLKEEDLCLVATVAFGMGIDKPDVRYVAHLDLPGSVEAYYQETGRAGRDGLP
SEVWMAYGMADVIQRRRMIDEGGAAEEIKRVERAKLNALLGICETAGCRRQAILAHFGEA
HPGRCGHCDTCLKPVETWDGTEAAIKALAAVYRTGERFGAGHLVDVLVGTINEKTERFGH
VDMPVFGAGKDLPARTWQSIFRQLLAAGLVRTDHSAFGALQLEPEARAVFKRERQVFFRK
DRPTSGKAARTAKGGAQRERADLAGSDLELFERLRAERFSIAKELNVPPYVVFPDTTLIA
LAKQRPRDFDDLLDIPGIGESKRERYGEAFLAVIDGYLDG
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
gtgatttgcatcccaccggccgaaacccatactcgaccgcccgacgaaagtgattccatg
cctcacaacgacaatgtttccgccgcgcgccttttcggggcgcaaggtgcctctgacccc
cttgatgttctgaaacgcgtttatggctattccgccttccgcggtcagcagctggacgtc
gtggagcatgtggtggcgggcggcgatgcagtggtgctctttccgacgggggcgggcaaa
tcgctctgctttcaaattcccgcactttgccgaaacggggtcggcatcgtcgtctcgccc
ctgatcgccttgatgcgcgaccaggtcgaggcgctgaagcaactcggtattcgtgccgcc
gcgcttaattcgtctctgacgcgcgacgaggcgatcactgtccgccgggcactttcggca
ggtgcgctcgacctgctctatgtcacgccggagcgcgccgtcaccgacggtttcgccgag
atgatcggcgatatggatattgcgctgttcgcgatcgacgaggcgcattgtgtctcgcag
tggggccatgatttccggcctgaatatcgcggcctggattgtctccggtcgcgctttccc
ggagtgccgcgcatagcactcacggctaccgcggatccgcacacgcgcgacgatatcatc
gagcggctggcgctcagcggagcgaaggtcttcacgaccagcttcgaccggccgaacatc
gcctatgagatcgtcgagcgcgatcagccgcgccagcagctcctcagattcctctcccgc
ttcaagggatcaagcggcatcgtctattgcctgtcgcgtgccaaggtcgaggacacggcg
gaatggctgaacgtgcaaggcgtgcgcgcacttccctatcatgccggcatggaccgcgtc
ctgcgagacgcccatcaggatgccttcctgaaggaggaggatctttgcctcgtcgcgacg
gtcgccttcggcatgggaatcgacaagccggatgtgcgttacgtcgcccatctcgatctg
ccaggctcggtcgaagcctattaccaggagaccgggcgcgcgggtcgcgacgggctgccc
tccgaagtctggatggcctatggcatggccgatgtcatccagcgtcggcggatgatcgac
gagggtggtgccgcggaggagatcaagcgcgtcgagcgggcgaagctcaatgcgctgctt
gggatctgcgagacggcgggctgccggcggcaggcgatccttgcgcatttcggcgaggcg
catcccggccgctgcggccattgcgacacctgcctgaagccggtcgagacctgggacggt
accgaagccgcgatcaaggcacttgccgccgtctaccgaacgggcgagcgcttcggcgcc
ggccacctggtcgatgtgcttgtgggaacgatcaacgagaaaacagagcggttcggtcat
gtcgatatgcctgtcttcggcgccggcaaggatctgccggcgcgaacatggcagtcgata
ttccggcaactgctcgccgccggcctcgtcaggaccgatcattccgccttcggcgcgctt
cagctcgagccggaggcccgcgccgtcttcaagcgcgagcggcaggtattctttcgcaag
gacaggccgacctcgggcaaggccgcccgaacggcgaagggcggtgcgcagcgcgagaga
gccgatcttgccggctccgatctcgaacttttcgaacggctgcgcgccgagcggttctcg
atcgccaaggaattgaacgtgccgccctatgtcgtcttcccggacacgaccttgatcgcg
ctcgccaagcagcgtccgcgcgacttcgatgacctactcgatattcccggtatcggcgag
agcaagcgcgagcgctacggcgaggcattcctggccgtcatcgacggctacctcgacggg
tag
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