Sinorhizobium mexicanum: FKV68_16540
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Entry
FKV68_16540 CDS
T06706
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
emx
Sinorhizobium mexicanum
Pathway
emx04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
emx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FKV68_16540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emx03019
]
FKV68_16540
03009 Ribosome biogenesis [BR:
emx03009
]
FKV68_16540
04131 Membrane trafficking [BR:
emx04131
]
FKV68_16540
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
emx04147
]
FKV68_16540
Messenger RNA biogenesis [BR:
emx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
FKV68_16540
Ribosome biogenesis [BR:
emx03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
FKV68_16540
Membrane trafficking [BR:
emx04131
]
SNARE
SNARE associated proteins
Others
FKV68_16540
Autophagy
Aggrephagy
Other aggrephagy associated proteins
FKV68_16540
Exosome [BR:
emx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FKV68_16540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_2
AAA_22
CDC48_2
AAA_33
TIP49
AAA_14
IstB_IS21
AAA_28
nSTAND3
NPHP3_N
AAA_18
RNA_helicase
NACHT
Mg_chelatase
ABC_tran
AAA_3
AAA_lid_PRS2_C
AAA_7
AAA_17
AAA_30
Sigma54_activat
AAA_24
DUF815
PhoH
TsaE
AAA_11
AAA_19
NB-ARC
SLFN-g3_helicase
Sigma54_activ_2
bpMoxR
Zeta_toxin
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
QLL62937
UniProt:
A0A859QM81
LinkDB
All DBs
Position
3435436..3437712
Genome browser
AA seq
758 aa
AA seq
DB search
MAQSQDNIVKLQVANTRPEDSGGPFARITPKIMSALGVEEGDIIEIVGKRHTGAIAFRGY
GEDEGLNIIRLDGLQRVNAGATSGDHVEVHKVDARPAQRVVLAPAQKNLRLQGSGEALQR
TFFRRPMAAGDVISTSVQQRISRNARTEHDIMRGLVELPAYGLQEIRLVVVSTQPRGIVT
MGENTIVELRPEFEEPKEARRADVTYDDIGGLGNAVDQVREMVELPLRHPELFQRLGIDP
PKGVLLHGPPGTGKTLLARAVANETEAHFYHIAGPEIMGSQYGESEQRLRQVFEEAAKNA
PSIIFLDEIDSIAPKREKVTGEVERRIVAQLLTLMDGLEPRQNIVVIGATNRRDSIDEAL
RRPGRFDREIVIGVPDQKGRREVLAIHARGMPLAEDVDLDEIARTTYGFVGADVGALARE
AAMDALRRILPDINLREGIPSEVLENLSVNQADFLSAMKRIQPSALREIMIQAPDVRWAD
IGGLDEAQMRLREGVELPLRSPQSFKRMGIRPAKGFLLFGPPGTGKTLLAKAVAREAEAN
FVATKSSDLLSKWYGESEQQVSQLFERARQVAPTVIFIDEIDSLAPARGGGIGEPAVTER
VVNTLLAEMDGLEDMQGVVVMAATNRPNLLDPALLRPGRFDELVYVPVPDQKGRRKILGI
HTRKMPLAKDVDLDDLAQRTERFTGADLEDLTRRAGLIALRENLDAQDVTSEHFNKAFDE
IRPSVTPEVEREYEAMLRTLKQEDPQRQQIGFLPRKGG
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcccaggacaatatcgtcaagcttcaggtcgccaacacccgtcccgaagac
tccggcggaccattcgcgagaattacgccgaagatcatgtccgcgctcggagtcgaggaa
ggcgacattatcgagattgtggggaaacgtcatacaggtgcgatcgccttccgcggctat
ggtgaagacgagggcctcaacatcatcagactggacggcctgcagcgtgtgaatgcgggc
gcaaccagcggcgaccatgtcgaggttcacaaggtagacgcgagacctgcccagcgggtc
gttctcgcccctgctcagaaaaaccttcggctgcagggatcgggcgaagcgcttcagcgt
acgttctttcgccgcccgatggctgccggggatgtgatttcgacatcggtgcagcagcgc
atcagccgcaacgcccgcacggagcacgacatcatgcgcggcctggtcgagcttccggct
tacggtctccaggaaatacgtctggtggtcgtgtcgacccagccgcgcggtatcgtcacg
atgggagaaaataccatcgtcgaactgcggccggaattcgaggagcccaaggaagccagg
cgagccgacgtcacctatgacgacatcggcggccttggtaacgccgtcgatcaagtgcgg
gaaatggtggagctgccgcttcgtcatccggaactgttccagcgcctcggcatcgatccg
ccgaaaggcgtgctgcttcacgggcctccgggaaccggcaaaacgcttctggcgcgggcg
gttgcaaacgaaaccgaggctcatttctatcatatcgccgggccggaaatcatgggtagc
caatacggcgaatccgaacaacggctgcgccaggtgttcgaggaggcggccaagaacgct
ccttccatcatatttctcgatgagatcgactcgatcgcgccaaaacgcgagaaagtgacc
ggagaggtggaacgccggatcgtcgcacagcttttgactttgatggacggtctcgagccg
aggcagaacatcgtcgttatcggtgccaccaaccgtcgtgactcgattgacgaagcgctg
aggcgtccaggccgcttcgatcgcgagatcgtcatcggagtgccggatcagaaaggcagg
cgcgaggttcttgccattcacgcgcgcggcatgcctctggcggaagacgtcgacctcgac
gaaatcgcaagaaccacatacggttttgtcggcgcggacgtcggcgcgctcgcgcgcgag
gcagcgatggatgcgcttcgcaggatattgccggacatcaatctcagagagggtatcccg
tccgaggtcctcgagaacctgagcgtcaaccaggccgacttcctgagcgccatgaagcgg
atacagccctcggcactgcgcgaaatcatgattcaggcccccgatgttcggtgggctgac
atcggtgggctcgacgaggcgcagatgcggcttcgcgaaggggtcgaattgccgttgcgg
tctccgcaatcattcaagcgaatgggcattcgaccggccaagggattcctgctgttcggt
ccgccgggaaccggcaagaccttgctggcgaaggccgtcgcgcgggaagcggaggcgaat
ttcgtggccaccaagtcgtcggacctgctttcgaaatggtacggggagtccgagcagcag
gtgtcgcagctcttcgaacgggcaaggcaggtcgcgccaaccgtgatcttcattgacgaa
atcgattcccttgcgccggctcggggcggcggcatcggcgagccggcggtgaccgaacgg
gtggtgaacacgttgctggcggaaatggacggattggaagatatgcaaggcgtggtcgtc
atggcggcaaccaatcggccgaatctcctcgatcccgccctgcttcgacctggccgtttt
gacgagcttgtctatgttccggttccggatcaaaagggccggcgcaagattctcggcatt
cacacgcgcaagatgccgctggccaaggacgttgacctggacgatcttgcacagaggacc
gagcggttcacgggcgccgatcttgaagacctcacaagacgcgcgggtcttatcgcgctc
agagaaaatctcgacgcccaggacgtcacgtcagagcatttcaacaaggcattcgatgaa
atccgcccgtccgtgacgcccgaagtcgagcgcgaatacgaggcgatgctccgcacgctg
aaacaggaagacccgcagcgacagcagatcggtttcctgcctagaaaaggcggctga
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