Sinorhizobium mexicanum: FKV68_20005
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Entry
FKV68_20005 CDS
T06706
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
emx
Sinorhizobium mexicanum
Brite
KEGG Orthology (KO) [BR:
emx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
emx03016
]
FKV68_20005 (thpR)
Enzymes [BR:
emx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FKV68_20005 (thpR)
Transfer RNA biogenesis [BR:
emx03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FKV68_20005 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QLL63558
UniProt:
A0A859R1N9
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All DBs
Position
4177970..4178560
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AA seq
196 aa
AA seq
DB search
MPRLFTALEIPRNAAMSLSLLRGGLPGARWIDVENYHITLRFIGDVDGRTADEIVERLDR
IERPEFQLQLTGTGAFGSKKPHSVWAGVSNEPEMFALQAEIERICQRLGLPSDPRKFTPH
VTLARLRSSRVEDVVNYLSGRGNFLTSPFTVARFVLLSSRDSVGGGPYLTEEVFPLHEAR
SPSLASRDKHPASSIW
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgccgagactgtttaccgccctcgaaattccgcgcaatgcagcaatgagcctttctttg
ctgcgcggaggtcttcccggagctcgatggattgatgtggagaactatcacatcactctg
cgtttcatcggcgatgtcgacggacgcaccgccgacgagatcgttgaaaggctcgaccgg
atcgaacgccccgaattccagctgcaactgacgggcacgggtgccttcggctcgaaaaaa
ccgcattcggtctgggccggcgtcagcaacgagccggaaatgttcgcgctccaggcggaa
atcgaacgcatctgccagcgcctcggcctgccgtcggacccgcgcaagttcacgcctcac
gtgacgctcgcgaggctgcgttcctcgcgcgtcgaggatgtggtgaattatctctccggg
cgcggcaatttcctcacctcaccttttacggtcgcccgcttcgttctcctctcatcgcgc
gattcggtcggcggcggtccgtacctgaccgaagaggttttcccgcttcacgaggcgcgg
tccccgagcctcgccagcagggacaagcaccctgcgtccagcatctggtag
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