Emticicia sp. 21SJ11W-3: MB380_00280
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Entry
MB380_00280 CDS
T09449
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
emz
Emticicia sp. 21SJ11W-3
Pathway
emz00541
Biosynthesis of various nucleotide sugars
emz01100
Metabolic pathways
emz01250
Biosynthesis of nucleotide sugars
Module
emz_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
emz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MB380_00280 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
emz01005
]
MB380_00280 (kdsA)
Enzymes [BR:
emz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
MB380_00280 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
emz01005
]
Lipid A
MB380_00280 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
UTA68263
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Position
complement(67932..68750)
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AA seq
272 aa
AA seq
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MLKVNQLKNQNSGNFFLIAGPCVVEGHDMALEIAEKVKKITDRLQIPYIFKASYRKANRT
KLNSFTGIGDELALSILKKVGDTLELPTITDIHESHEAAIAARFVDVLQIPAFLCRQTEL
LVAAAETGKAVNVKKGQFMHGSGMGFAVEKINAVNPDAQVMLTDRGNSFGYSDIVVDYRN
IVEMKAFNVPVVMDCTHSLQQPNQSSGVTGGKPALIETIAKAAIAVGADGIFIETHLEPS
MAKSDGANMLPLNQLESLLEKLVRIREAVKKN
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaaagtcaatcaattaaaaaaccagaattcgggcaattttttcttaattgccggg
ccatgtgtggtagagggccatgatatggctcttgaaattgccgagaaagtaaagaaaatt
accgaccgcctgcagataccttatatatttaaggcgtcgtatcggaaagccaaccgaacc
aaattgaactcttttacaggtattggtgatgaacttgccttgagtattctaaaaaaagta
ggtgacacgcttgaattgccaaccataacagacatccacgagtctcatgaggccgccata
gctgccaggtttgtagatgttttgcagatacctgcttttctatgccgccagaccgaactg
ctggttgccgctgctgaaaccggcaaagctgttaatgttaagaaaggacaatttatgcac
ggctcaggaatgggctttgccgttgaaaaaattaatgccgtaaaccctgacgcacaggta
atgctgaccgaccgcgggaattcgttcgggtattctgatattgtggtcgactaccgcaat
attgtcgaaatgaaggcctttaacgtgcccgtagtaatggattgcacgcactcgcttcaa
caacctaatcagtcatcaggtgttacgggtggtaaaccggctctgattgaaaccatagcc
aaagcagccatagccgtaggagccgacggaatatttattgaaacccacctggagccatct
atggctaagtcagacggtgccaatatgttaccgctcaaccagcttgaatctttattggaa
aaactggttagaatccgcgaagcggtaaagaaaaactaa
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