Emticicia sp. 21SJ11W-3: MB380_02665
Help
Entry
MB380_02665 CDS
T09449
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
emz
Emticicia sp. 21SJ11W-3
Pathway
emz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MB380_02665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emz03019
]
MB380_02665
03400 DNA repair and recombination proteins [BR:
emz03400
]
MB380_02665
Enzymes [BR:
emz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MB380_02665
Messenger RNA biogenesis [BR:
emz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MB380_02665
DNA repair and recombination proteins [BR:
emz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MB380_02665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
HRDC
RQC
RecQ_Zn_bind
ResIII
BUD22
HTH_40
DNA_pol_phi
Motif
Other DBs
NCBI-ProteinID:
UTA68714
LinkDB
All DBs
Position
complement(646556..648937)
Genome browser
AA seq
793 aa
AA seq
DB search
MVEPIIKQSLKEKLKEIFGFDAFRGEQEAIINNIVAGKNTFVIMPTGAGKSLCYQLPAMV
LEGTAIVISPLIALMKNQVDQMTAFGINAQFLNSTLNKAEMTKVKNDVLSGECRLLYIAP
ESLTKEDNLSFLQKAKLSFVAVDEAHCISEWGHDFRPEYRRIRGIIDDINPNLPIIALTA
TATPKVQQDIKKNLIMDEAPVFKSSFNRKNLYYEIRPKVDSKKQLIRYILNNKGKSGIIY
CLSRKKVEEIANLLSVNGIKALHYHAGLDADTRMKNQDAFLNEEADVIVATIAFGMGIDK
PDVRFVIHYDAPKSLEGYYQETGRAGRDGLEGNCLMFYSFDDILKLEKFNKDKTVTERDN
AKALLMEMVAYSNLGICRRRQLLSYFGEYSEKDCGFCDNCLKPTKKFKIEDEAVLALKAI
QQVGERFDIQHIADVLTANTANAYIRSYEHDKLAVYGKGKSMFAEAEDEDDEDDEEEELE
LANDDDMDEEEDNTPVATKSPSHSPKKAEKPTKKSDNKKTPNDYWVSILRQMMVLGFIEK
DIENAYGVVKLSEKGKSFIADSYPITISEDHNYENTESSDDDDVQMNGGPSGGGGAFDSA
LFELLKALRKKIAKEKNVPPYVVFQDPSLEEMATTYPTTGQDLAQINGVGLGKVQKFGKP
FLELISKYVEENEIETTQDLVVKSAVNKSKIKIYIIQQIDRKIDLDEIAESKDLTMPELI
EEIEHICYSGTRLNLDYYINQVIDEEHQDEIYEYFMAAETDNIRAALKTFEGDDITEEEL
RLMRIKFLSEMAN
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggtagaaccaattattaaacaatcattaaaggagaaactcaaagaaattttcggcttt
gatgcttttcgtggcgaacaggaagcaattatcaataacattgtagcaggaaaaaatact
tttgttattatgcctaccggcgctgggaaatctctatgttatcagttgcccgctatggta
cttgagggcactgctattgtaatttccccgcttattgccctgatgaaaaatcaggttgac
caaatgacagcctttggtatcaatgctcagtttttaaattcaacactgaataaggctgag
atgaccaaagtgaagaacgatgttttaagcggtgaatgccgtttactttatatagctccg
gaatctctcacaaaagaagataacctgtctttcttacaaaaagccaaactctcttttgta
gcagtagatgaagcccactgtatatctgaatggggccatgatttcagacctgagtatcgt
agaatcagaggaatcattgacgatatcaatcccaatctgccaattattgcattgacggct
accgcgacgccaaaagtacagcaggatatcaagaaaaacctgataatggacgaggccccc
gtgttcaagtcgtcgtttaaccgcaagaacttgtactatgagattcgtcctaaagtagat
tcgaagaagcaattaataaggtatattcttaacaataaaggtaagtcgggcataatttac
tgcctcagccgtaaaaaagttgaagaaattgccaacctgctgagcgtaaacggtattaag
gccctgcattatcatgccggactggatgccgacacccggatgaaaaatcaggacgcgttt
ctgaatgaagaagctgatgtaattgtggcaacgattgccttcgggatgggcattgacaaa
cccgatgtgcgctttgtgattcactatgatgcgcccaagtcgctggaaggctactatcag
gaaacaggaagagccggccgcgacggactggaaggtaactgcctgatgttctacagcttt
gacgacattttaaaactggagaagttcaataaagataagaccgttactgaaagagacaac
gccaaggctttgctgatggaaatggtagcgtactctaacctgggtatctgccgccgccgt
cagttactaagttattttggtgaatactcagaaaaagactgtggtttttgcgataactgc
ctgaaacccaccaagaaatttaaaattgaagatgaagccgtgctggccttaaaagccatt
cagcaggtgggcgaaaggtttgatattcagcacattgctgatgttcttacagccaataca
gccaatgcttacatccgcagctatgaacacgacaaactggccgtttatggtaaagggaaa
agcatgtttgctgaagcagaggatgaggatgacgaagacgatgaagaagaagaattagaa
ttggccaatgatgatgatatggacgaagaggaagacaacacccctgttgctaccaaaagt
ccgtcacactcacctaaaaaagcagaaaaaccaacaaaaaaatctgacaacaaaaagacc
cctaacgattactgggtgtctatccttcgtcagatgatggtgcttggttttattgaaaaa
gatattgaaaacgcctatggggtagtaaaactgtcggaaaaaggcaaaagctttattgcc
gactcttaccctattacgatatcagaagaccataactacgaaaataccgaaagcagtgac
gacgacgacgtacaaatgaacggcgggccgtctggcggaggtggtgcgtttgactcagcg
ttgtttgagttgctgaaagcgcttcgtaaaaaaattgccaaagaaaagaacgtgccaccg
tatgtggttttccaggatccctcactggaagaaatggcaaccacctacccaactaccgga
caagacctggctcagataaacggggttggccttggcaaagttcaaaagtttgggaagcct
tttcttgagctgatttcaaaatacgtagaagaaaacgaaattgaaaccacgcaggacctg
gttgtaaaatcggctgtcaataaatcaaaaataaagatttatatcattcagcagattgac
cgcaagattgatctggacgaaattgcagagtcgaaagacctgacaatgcctgaactgatt
gaagaaattgagcacatctgctattctggtacaaggctgaatctggactactacatcaat
caggtaatagatgaagaacatcaggacgagatttatgagtattttatggccgcagaaacc
gataatatccgtgctgcactcaagacttttgaaggcgacgatataactgaagaagaatta
agattgatgagaataaaattcttgtcggaaatggcaaattaa
DBGET
integrated database retrieval system
