Emticicia sp. 21SJ11W-3: MB380_05040
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Entry
MB380_05040 CDS
T09449
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
emz
Emticicia sp. 21SJ11W-3
Pathway
emz03420
Nucleotide excision repair
emz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
emz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MB380_05040
03430 Mismatch repair
MB380_05040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emz03400
]
MB380_05040
Enzymes [BR:
emz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MB380_05040
DNA repair and recombination proteins [BR:
emz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MB380_05040
MMR (mismatch excision repair)
Other MMR factors
MB380_05040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_12
DGKD_4H
AAA_22
CarD_TRCF_RID
ResIII
TCAD7
Motif
Other DBs
NCBI-ProteinID:
UTA69169
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All DBs
Position
complement(1205397..1207682)
Genome browser
AA seq
761 aa
AA seq
DB search
MQNQNNYLDKLNPPQREAVTYREGPLMIIAGAGSGKTRVLTYRIAWLIEQGVDPFNILSL
TFTNKAAGEMRHRIEQIIGNDAKNLWMGTFHSIFAKILRFEGKRLGYTSDFTIYDTDDSK
SLIRTIIKEMGLDDKTYRPNYVLNRISNAKNALVSWEAYATNPIYMEDDKAAKMPEIGRL
YKTYQLRCFQANAMDFDDLLFNTNVLFRDHLDILNKYQHKFKHVLVDEFQDTNVSQYLIT
KKLSAVHQNICVVGDDAQSIYAFRGANIQNILNFKTDYPELHVVKLEQNYRSTKTIVSAA
NSVIARNKEQLEKNVFTDNEEGPKIEVIKAASDNEEARLIATSIFEAKNNDGLKNTEFSI
LYRTNAQSRAFEEALRKINIKYRIVGGLSFYQRKEIKDLLSYLRFTINQNDEEAFKRIIN
LPKRGIGDTTVAKIVVTAAENNRSVWEVVSSINQYVAGRAAQAIDDFATLIKSFKLMIEE
GKDAHTVASYIAKASGILRELYEDKTVEGLSRYENVQELLNSVKQFVDNPENEEKTLSAF
LQTVTLMTSADQEDEDGDTDRVTLMTIHGAKGLEFKYVYIVGLEENLFPSQMMLQNRSDL
EEERRLFYVAITRAEKKLTLSYAETRYNYGRLNYCEPSRFLEEIDKRFLQMSKSRTVTYE
STQAKADRPTSTLSFAKKESVISNLKPVQKAVPPPQHTPSGDFAPSDTSNLKEGDKVEHP
KFGFGTVKKMDVNGSDRKATIVFEGQGEKTLLLSFAKLRIL
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaaccagaacaattatttagacaaacttaacccaccccaacgagaagccgtaact
taccgcgaaggccccctgatgattattgcaggtgcaggctctggtaaaacacgtgtgctt
acctaccgcattgcctggttgattgagcagggggttgaccctttcaatatcctgtcttta
acgtttaccaataaggcggccggtgaaatgcgacaccggattgagcagattataggcaat
gatgctaaaaatctgtggatgggtacatttcactcaatttttgcaaaaatactacgcttc
gaaggtaaaagactgggatatacttcagatttcaccatttatgatactgacgattctaaa
tctctgataagaacgattattaaagaaatgggcctggacgataaaacgtatcgcccgaac
tacgtactgaatcgtatttctaacgctaaaaatgcgctggtatcatgggaggcttatgcc
accaacccgatttacatggaagacgacaaagctgccaaaatgcctgaaattggccgtttg
tacaaaacgtatcaactgcgttgctttcaggccaatgccatggactttgacgatttactg
tttaataccaacgttctgttccgtgaccacctggatattctgaacaaataccagcacaag
tttaagcatgtgttggttgatgagtttcaggataccaacgtatcgcagtacctgattacc
aaaaaactttcggccgttcatcagaatatttgcgtagtgggcgatgacgcccagagtatc
tatgcctttcgtggagccaatattcagaatattctgaattttaaaaccgactacccggaa
ttgcacgttgtaaaactggagcagaactaccgctctaccaaaacgattgtaagtgcggct
aattcggttattgcacgtaataaagagcagctggagaaaaatgtctttacagataacgaa
gaaggcccgaagattgaggtaatcaaggcggcgtcagacaacgaagaagcaaggctgatt
gccaccagtatttttgaagccaaaaataatgatggcttaaaaaataccgagttttcgata
ttgtatcgtaccaatgcgcaatcaagggcatttgaagaggcactgcggaaaatcaacatc
aagtaccgcattgtgggtgggctttctttttatcagcgcaaagagataaaagatttactg
tcatatttaagatttaccataaatcagaatgacgaagaagcctttaagcgtatcattaat
ttacccaaaagaggaattggtgacaccaccgtagccaaaatagtagtaactgcagccgag
aataaccgctcggtttgggaggtggtaagcagtattaatcaatacgtggcagggcgcgcc
gcacaggctattgacgattttgccactctgattaagagtttcaagcttatgatagaagaa
ggcaaagatgcccacacggtggcgtcttatattgccaaagcatcaggcattttgcgtgag
ttatatgaagataaaacagtagagggcttatctcgctacgaaaacgtacaggagttatta
aactctgtgaaacagtttgttgataaccctgaaaacgaagaaaagaccttaagcgccttt
ttgcagacggttacgttaatgacatcggcagatcaggaagacgaagacggcgatacagac
cgggtaaccctaatgactattcacggagccaaaggtctggagtttaaatatgtttacatt
gtgggtttggaagagaacctctttccgtcgcagatgatgctgcagaaccgcagtgatttg
gaggaagaacgccgcttgttttacgtggctattacccgtgcagaaaagaaactgacactg
agctacgccgaaacccggtataattacggccgattgaattattgtgaacccagccgtttt
ctggaagaaatagacaaacgttttttgcagatgtctaaaagccgcacagttacttatgag
tcaacgcaagccaaagctgacaggcccacctctacgttatcgtttgctaaaaaagaaagt
gttatatctaatctgaaacctgttcagaaggcggttccaccaccacaacatacaccgtcc
ggcgatttcgcgccaagtgataccagcaacctgaaagaaggtgataaagtagaacaccca
aaattcgggtttggaacagtgaagaaaatggatgtaaacgggtcagacagaaaagcgaca
attgtatttgaggggcagggagaaaaaactttactactgagtttcgccaagttgagaatc
ctgtaa
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