Emticicia sp. 21SJ11W-3: MB380_07545
Help
Entry
MB380_07545 CDS
T09449
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
emz
Emticicia sp. 21SJ11W-3
Pathway
emz03030
DNA replication
emz03430
Mismatch repair
emz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
emz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MB380_07545 (dnaE)
03430 Mismatch repair
MB380_07545 (dnaE)
03440 Homologous recombination
MB380_07545 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emz03032
]
MB380_07545 (dnaE)
03400 DNA repair and recombination proteins [BR:
emz03400
]
MB380_07545 (dnaE)
Enzymes [BR:
emz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MB380_07545 (dnaE)
DNA replication proteins [BR:
emz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MB380_07545 (dnaE)
DNA repair and recombination proteins [BR:
emz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MB380_07545 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
UTA69654
LinkDB
All DBs
Position
1784903..1787890
Genome browser
AA seq
995 aa
AA seq
DB search
MYLNCHSHFSFNYGTLSIKDLVARAKAAGCRNLALTDINTTSGLFDFIKECKKADIKAIV
GVEFRNSDEVKYTVLAKNQNGLHEINRFLSEYLASGKPYPQKAPPFRDSFAIYPMSYFES
NPTLDEHEYIGVRFWELTRLFKFQKHPAIQKVLAIHTVTFHDKITFNLHRLLRAISKNVL
LSKLPKNEEACPDEIFVDIPTLIDKFTDYRMFMKNTALVINHCNFEFNTHTDKNKRFYTK
NKETDMEFLRKLTLDGASNRYDITNAEVIRRIDKELEIISQMNFAAYFLMTWDIINYARS
RGYFHVGRGSGANSIVAYCIGITDVDPIELNLFFERFINPERTSPPDFDIDFSWDERDEI
IQYIFKRYGKEHVCLLATYNTFQRNSAIRELAKVFGLPKPEVDMYLRYPERAQSNEYMRY
ILKYAPLMDEMPNNLSIHAGGILISEEPLFNYTALQPMPKGFPICQWDMYVAEEIGFAKF
DVLSQRGLGHIKMAVDLVRDNHRINIDIHQVHKFKKDENIRKQLQANETMGCFYIESPAM
RQLMWKLRCDNYLTLVAASSIIRPGVASSGMMKAYIERHHDPHNIQYLHPRMKDLLEDTY
GVMIYQEDVIKVAHGFAKMTLGEADMLRRAMSGKYRARMEFQKIVDKWFANCRAEGYSDE
LAKEVWRQVESFAGYSFSKAHSASYAVESYQSLYLKTYFPLEFITAVINNFGGFYRTEFY
IHEAKRCGATIEVPDINESNMLTGIKGKTIWLGWIHIKSLEVKIVKNILDERNQKGRFLS
FADFAHRVPIGLEQLIVLIRVGAFRNFGMTKKELLWEAHLLLHNNFKPSAYKEALFEYLE
PESHLPALSYDPLEDMYDEIEFLDFTVGSPFDLCAEPVADTCTIDKLHEMLGQPVNIYGY
LITWKSIRAKNGQLMGFGYFYDYSGKFFDTVHFPKTVEKYPLRGSGIYHLCGKVVEDFGF
YSIEVEAMRKVELKPDPRSVSEPISDASLAFVISD
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaaactgccacagccatttcagtttcaattatggtacgctcagcatcaaagat
ttggttgccagagccaaagccgccggatgccgtaaccttgcgcttactgatattaacacc
accagcggcctgttcgatttcataaaagagtgtaaaaaagccgatattaaagccattgta
ggggtagagttcagaaacagcgatgaagtaaaatacactgtactggcaaagaaccagaat
gggctgcatgaaatcaaccggtttttgtctgagtatctggcttccggaaagccctatccg
caaaaggcgccgccattccgggatagttttgctatttatccgatgagctattttgaatca
aacccaacgcttgacgaacacgagtatataggcgtgcggttctgggagctaacccggctt
tttaagtttcagaagcacccggctattcagaaggtgctggccatacatacggttacgttt
catgacaagattacctttaacctgcaccgtttgctgcgggccatcagtaagaatgtactt
ttgagcaagctgcctaaaaatgaagaggcttgccctgacgagatttttgttgatatccca
actctgatagacaaatttaccgattaccgtatgttcatgaaaaatactgctctggtaatt
aaccattgcaattttgagtttaacacgcacaccgataagaataaaagattctatactaaa
aataaagaaactgatatggagtttctgcggaaacttactttagatggtgcttctaaccgg
tatgatataacaaatgctgaagtaatcaggcggatagataaggagctggagattatcagc
cagatgaactttgcggcgtattttctcatgacctgggacatcatcaattatgccagatca
agagggtattttcatgtaggcaggggctctggggctaattcaattgtagcctattgcata
ggtattacagatgtagatcctattgaattaaacctgttctttgagcggttcatcaatcct
gaacgcacatcaccgcctgattttgatattgatttttcgtgggatgagcgcgacgaaatc
attcagtatatttttaagcgctacggtaaagagcacgtttgcctgctggccacctataac
acttttcagcgtaactcagccatacgtgagctggccaaggtttttggcctgcccaagcca
gaggtggatatgtacctacgctaccccgaaagggcccagagcaacgaatacatgcggtat
attctgaaatacgctccgttgatggacgaaatgcctaacaacctgtctatccatgcaggg
ggtattctgatttcggaagaacccctgtttaattataccgcactgcaacccatgcccaag
gggtttccgatatgccagtgggatatgtacgtagctgaagaaattggttttgccaagttt
gacgtgttgtcgcaacgggggctggggcatataaaaatggctgttgacctggtgcgtgac
aaccacagaattaacattgatatccatcaggtacataaattcaaaaaagatgaaaacatc
aggaagcaactacaggccaacgaaaccatgggctgcttttatatagagtcgccggctatg
cgccagctgatgtggaaactcagatgcgataattaccttaccctggtagcggccagctct
attatacggccgggtgttgccagcagtggcatgatgaaagcctacatagaacggcaccac
gacccccacaatattcagtacctgcatccaagaatgaaagatttgctggaagatacctac
ggagtaatgatttatcaggaagatgtgataaaagtggctcatggatttgcaaaaatgaca
ttgggcgaggccgatatgctcaggcgtgccatgtctggcaaatatagagccagaatggaa
tttcagaaaatagtagacaaatggtttgccaattgccgggctgaaggctacagcgacgaa
ctggcaaaagaagtatggcggcaggtagagagttttgcaggttatagtttttcaaaggcg
cattcggcgtcttatgcagtagagagttaccagagtttgtatctgaaaacctatttccca
ttagagtttattacggctgttattaacaattttggtggtttttaccgaaccgagttttat
atacatgaagccaaacgttgcggagcaactattgaagtgccggatattaatgaaagtaat
atgcttacaggcattaagggaaaaaccatctggctgggttggattcatatcaaaagcctt
gaagtaaaaattgttaaaaacatactcgacgaaaggaaccagaaaggccgtttcttgtct
tttgctgattttgcccatcgcgttccgattggccttgaacaactgattgtgttaataaga
gtgggggcattcaggaatttcggcatgaccaagaaagaactgctgtgggaagcccacttg
ctgttgcataataatttcaagccgtcggcatataaagaggcactgtttgagtacctggag
ccagaatcccatctgccggctttgtcttatgaccccctggaagatatgtatgacgaaata
gaatttcttgattttaccgtaggctcccccttcgatttatgtgccgagcccgtggccgat
acctgcaccatagataaactgcacgaaatgctgggccagcctgttaacatatacggctac
ctgataacctggaaatcaatacgtgccaaaaacggccagttgatgggctttggttatttt
tatgattactcagggaaattttttgataccgtacattttcctaaaacggttgagaaatac
ccgttgcgtggttctggtatctatcatctttgtggtaaagtggtagaagatttcggcttt
tattcaatagaagtagaggctatgcgtaaagttgaactaaagccagaccccagaagtgta
tcagaacctatctctgatgcctcactggcttttgtaatcagcgattaa
DBGET
integrated database retrieval system
