Emticicia sp. 21SJ11W-3: MB380_10740
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Entry
MB380_10740 CDS
T09449
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
emz
Emticicia sp. 21SJ11W-3
Pathway
emz03030
DNA replication
emz03430
Mismatch repair
emz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
emz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MB380_10740 (dnaE)
03430 Mismatch repair
MB380_10740 (dnaE)
03440 Homologous recombination
MB380_10740 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emz03032
]
MB380_10740 (dnaE)
03400 DNA repair and recombination proteins [BR:
emz03400
]
MB380_10740 (dnaE)
Enzymes [BR:
emz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MB380_10740 (dnaE)
DNA replication proteins [BR:
emz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MB380_10740 (dnaE)
DNA repair and recombination proteins [BR:
emz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MB380_10740 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
DUF7398
RST
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
UTA70281
LinkDB
All DBs
Position
2532170..2535754
Genome browser
AA seq
1194 aa
AA seq
DB search
MQFSHLHNHTQFSLLDGASDIKKLFAKAQADNMPAMAITDHGNMFGVFDFVATAGKYNVK
PIVGCEFYVVEDHTRKQFTKEQKDQRFHQLLLAKNATGYKNLTKLCSLGYIEGLYGKFPR
VTKALIEQYKEGLIATTCCIGASVPKAILRKGEEEGEKEFRWWLDRFGEDYYVEIQRHDI
PEQIKVNEVLVKFAKKYGVKIIASNDSHYVDQQDWVAHDILLCVNTNEKLSTPSAKEFND
DESSSRDTRFAFYNDQFYFKTTQEMSTLFHDLPESIDNTNEIVDKVETLKLKRDIMLPNF
PIPPEFKIHADDVMNQWEYLKHLTYEGAMKRYGEIGVEVQERLDFELFTIKSMGFAGYFL
IVSDFIKAGRDLGVMIGPGRGSAAGSAVAYCIGITNIDPIKYNLLFERFLNPDRKSMPDI
DTDFDDEGRQKVIDYVVQKYTKNQVAQIITYGTMATKSSIKDVARVMELPLADANYIAKL
IPDKPTYGIDFQKLIHYPLDGPKSLSELGLQPDEIENVKKVRAMYNGADLTAKVLQQAEK
LEGTVRNTGIHAAGIIIAPEALYNILPVSTSKDSDLLITQYEGKIIEDAGVIKMDFLGLR
NLTIIKDCLRMIKENHGVEIDIDSIPLDDKLTYELFQRGETNAVFQFESDGMKKYMKDLK
PDRLDDLIAMNALYRPGPIAYIPNFINRKHGREEVTYDLPDMEEYLGETYGITVYQEQVM
LLSQKLAGFSKGDADVLRKAMGKKDRKTLDKLKPQFLEGAKAKGHPEKVLEKIWTDWEAF
ASYAFNKSHSTCYAFVAYQTAYLKAHYPSEYMAAVLTSQLGNIDKITFFMEECRAIGLPI
LGPDVNESHKQFSVNKKGEIRFGMGGIKGTGDAAVDAVIEERTKGGAFTDIFDFITRVNL
RTVNKKTLESFAYAGAFDCFTELHRAQYFDDSDGTSLIEKLIRYANKFHENASAGQNSLF
GAVGGSGFDIARPKIAPTEEWGDIQKLKFEKDVVGFYISGHPLDEFSMEMKRCVPLDQVF
DANNLNKEITIGGVVSSVQHKQSKNGNPFGILKLEDYNSSMEMMLFGQDYVNFSKFLNMG
LFLFIRGKLQNKWGREGEWDFKPLNMELLSELRNKMFKEIKIIIGLQQINAGLIEEIDAA
TSRFPGTFDFKLSVHDADERLDVLLLSRKSKVASTNDFVKELRKIVGDENVVFA
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgcagttttctcatttacataaccacacgcagttttcattactcgacggcgcctcagat
attaaaaaattgtttgccaaagcacaggccgacaatatgcccgctatggctattacagac
cacggcaatatgtttggggtgtttgactttgtggccactgccggcaagtataacgtaaag
cccattgttggctgcgagttttatgtagtagaagaccacacccgcaagcagtttaccaaa
gaacagaaagaccagcgtttccatcagttattactggccaaaaatgccaccggatataaa
aacctgaccaaactttgctctttaggctacattgaaggcctttatggaaagtttccgagg
gttaccaaggctttaattgagcaatataaagaggggcttatagctacgacctgctgtatt
ggggcgtcggtacccaaagccattttgaggaagggtgaagaagagggagaaaaggagttc
aggtggtggctggacagattcggcgaagattattatgtggagattcaacgacatgatatt
ccggagcaaattaaggtaaacgaggtgctggtgaagtttgccaaaaagtatggggtaaaa
atcattgcctccaacgatagccactatgtagaccagcaagactgggtggcacacgatatt
ctgctttgtgttaataccaacgaaaaactgtcgacaccttctgccaaggagtttaatgat
gacgagtcttcttcaagagatacgcggtttgcgttctacaacgaccagttttatttcaag
acaactcaggagatgtcgaccttgtttcatgacctgccggagtcaattgataacacaaac
gagattgtagataaagttgaaacgctcaaactgaagcgagacatcatgttgccgaatttc
ccgattcctccggaatttaagattcacgcagatgatgtgatgaaccagtgggagtacctg
aaacacctgacctacgaaggcgccatgaaacgctatggcgaaataggggtagaagttcag
gaacgccttgattttgagctcttcaccatcaaatcaatgggttttgcggggtactttctg
atagtatctgactttatcaaggccgggcgagacctgggtgttatgataggccccggccgg
ggtagcgccgctggtagcgccgtggcctattgcattggtattaccaatattgaccccatt
aaatacaatctgctttttgagcgtttcctgaaccctgaccggaaatcaatgcccgatatt
gataccgactttgatgatgaaggccgccagaaggtgattgactatgttgtgcagaaatac
accaaaaatcaggttgcgcagattattacttatggtacgatggccacgaaatcgtctatt
aaagatgtggcccgtgttatggaattaccattggctgacgccaactacattgccaagctg
atacccgataaacctacttatggtattgattttcagaaactgatacattatccgcttgac
ggccccaaaagtctttctgaattaggtttacaacccgatgagattgaaaatgtgaagaaa
gtgcgggccatgtataatggcgctgacctgacagccaaagtattgcagcaggccgaaaaa
ctggaaggaaccgtacgtaataccggaatacatgctgcgggtattattattgcgcccgaa
gcattgtataatattctgccggtttctacctctaaagattctgacctgctgataacccaa
tatgagggcaaaattattgaagatgccggggttatcaagatggactttctgggtctgcga
aacctgaccattattaaggactgcctgcggatgattaaggagaatcatggcgtggaaatt
gatattgacagtatccctctggatgataagttaacttatgagttgtttcagagaggggag
accaatgcggtattccagtttgagtctgacggtatgaaaaaatacatgaaagacctgaaa
cctgaccgcctggatgacctcattgccatgaatgccctgtatcgcccggggcctattgcg
tacattccgaattttattaaccgtaagcatggccgggaagaagtaacctacgacttgcca
gacatggaggagtatctgggtgaaacctacggtattacggtttatcaggaacaggtaatg
ttgttgtcgcagaaactggccgggttctctaaaggagatgccgacgttttgcggaaagca
atgggtaaaaaagaccggaagacacttgataaactgaaaccgcagtttctggaaggagcc
aaagccaaggggcatcctgaaaaagtacttgaaaaaatatggaccgactgggaagccttc
gcttcttatgcctttaacaagtcgcactctacctgttatgcgtttgtggcgtatcagaca
gcctatctgaaagcccattatccgtcagaatacatggcggccgtgttaacgtctcaatta
ggtaatattgataagataaccttctttatggaagagtgccgggccattggcctgcctatt
ctggggcctgacgtaaacgagtcgcacaagcagttcagtgttaacaaaaaaggagaaata
cgctttggtatgggtggcattaaaggtaccggcgatgccgccgtagatgccgtaattgaa
gaacgaaccaaaggtggtgcatttaccgatatttttgattttataacacgtgttaacctg
agaaccgttaacaaaaagacactggaatcttttgcttatgccggggcttttgactgcttt
actgaattacaccgggcacaatattttgatgattctgacggcacttcgctgattgaaaag
cttatcagatatgccaataaatttcatgagaacgcctctgccgggcaaaattctttgttt
ggtgccgtgggtggaagcggttttgatattgccagacctaaaattgctccaaccgaagag
tggggtgatattcagaagctgaaatttgaaaaagatgtggttgggttttacatttcaggg
catccgctggatgaattctcgatggaaatgaaacgttgtgtgccgcttgaccaggtcttt
gatgcaaataatctcaataaagaaataaccataggcggggtggtatcatcggtgcagcac
aagcaatccaaaaacggtaacccgtttggtattctgaaactggaagattacaactcaagc
atggagatgatgctgttcgggcaagactacgtcaatttctcgaaattcctgaacatgggg
ctgtttttgttcatcagaggcaaactgcaaaacaaatggggcagggaaggagaatgggac
tttaaacctttgaacatggagctgctaagcgaattacgcaacaagatgtttaaagagata
aaaatcattattggtttgcagcaaattaatgcagggcttattgaagaaatagatgcagct
acttcgcgctttccgggtacgttcgacttcaagttatctgtacatgatgccgatgaaagg
ttagatgtcttactgttgtcgcgcaagtctaaagtggcttcaaccaacgatttcgtgaag
gaactcaggaaaattgtaggtgatgaaaatgttgttttcgcctga
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