Escherichia coli NA114 (UPEC): ECNA114_0711
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Entry
ECNA114_0711 CDS
T01998
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ena
Escherichia coli NA114 (UPEC)
Pathway
ena03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ena00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ECNA114_0711 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ena03400
]
ECNA114_0711 (uvrB)
DNA repair and recombination proteins [BR:
ena03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ECNA114_0711 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ECNA114_0711 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SBDS_domain_II
IF2_N
UB2H
DUF1844
PRDA1_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEG35533
LinkDB
All DBs
Position
773391..775412
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPR
FTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALG
QNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactgaattccgcttttaaaccttctggcgatcagccggaggcg
attcgacgtctcgaagaggggctggaagatggcctggcgcaccagacgttacttggcgtg
actggctccgggaaaaccttcaccattgccaatgtcattgctgaccttcagcgcccaacc
atggtacttgcgcccaacaaaacgctggcggcccagctgtatggcgaaatgaaagaattc
ttcccagaaaacgcggtggaatatttcgtctcctactacgactactatcagccggaggcc
tatgtaccgagttccgacacctttattgagaaagatgcctcggtaaacgaacatatcgaa
cagatgcgtttatccgccaccaaagcgatgctggagcgacgtgatgtggttgtggtggcg
tctgtttccgcgatttatggtctgggcgatcctgatttatatctcaagatgatgctccat
ctcacggtcggtatgattatcgatcagcgcgcgatcctgcgccgactggcggagctgcaa
tatgcccgtaatgatcaagcattccagcgtggtactttccgtgttcgtggcgaggtgatt
gatatcttcccggcagaatcggatgacattgcacttcgcgtggagctgtttgacgaggag
gtggaacgattgtcgttatttgacccgctgaccgggcagattgtttccactattccacgt
tttaccatctacccgaaaacgcactacgtcacgccacgcgagcgcatcgtccaggcgatg
gaggagatcaaagaagagctggccgccagacgtaaagtgctattggaaaacaacaaactg
ctggaagagcagcggctgacccagcgtacccagtttgatctggagatgatgaacgagcta
ggctactgttcggggattgagaactactcgcgcttcctctccggtcgtggaccgggtgag
ccaccgccgacgctgtttgattacctgcctgctgatgggctgctggtggtcgatgaatct
cacgtcaccattccacaaattggcggcatgtatcgcggtgaccgggcgcgtaaagagaca
ctggtggagtacggcttccgcttgccatcagcgctggataaccgcccgctgaaatttgaa
gagttcgaagcattagcgccgcaaaccatctatgtttcggcgacgccgggtaattacgag
ctggaaaaatccggtggcgatgtggtggatcaggttgtgcgtccaacaggcttactcgac
ccgattattgaagtgcgtccggtagcgacacaggtggatgatcttctatcggagattcgt
cagcgagcggcaattaacgaacgcgtactggttacaactctgaccaagcggatggcggaa
gatctcactgaatatctcgaagaacacggtgagcgcgtgcgttatcttcactcagatatc
gataccgtcgaacgtatggagattatccgcgacttgcgtctgggtgagttcgacgtattg
gtagggatcaacttactgcgcgaaggtctggatatgccggaggtttcgctggtggcgatc
ctcgacgctgacaaagaaggcttcctgcgttccgaacgttcgttgatccagaccattggt
cgtgcggcacgtaacgttaacggtaaagcgattctctacggcgataagatcaccccatca
atggcgaaagcgattggcgaaaccgaacgtcgccgcgagaaacagcagaagtacaacgag
gaacacggcattacgccgcaaggcttgaacaagaaagtggtcgatatcctggcgctgggg
cagaacattgccaaaaccaaagcgaagggcagaggaaaatcgcgcccgattgttgagccg
gataatgtgccgatggatatgtcgcctaaagcgttacagcagaagatccatgaactggaa
gggttgatgatgcaacacgcgcagaatctggagttcgaagaagcggcgcaaattcgtgac
cagttgcatcagttgcgtgagctgtttattgccgcgtcgtga
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