Escherichia coli NA114 (UPEC): ECNA114_2013
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Entry
ECNA114_2013 CDS
T01998
Name
(GenBank) Flagellar operon related RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ena
Escherichia coli NA114 (UPEC)
Pathway
ena02020
Two-component system
ena02026
Biofilm formation - Escherichia coli
ena02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ena00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ECNA114_2013
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECNA114_2013
09142 Cell motility
02040 Flagellar assembly
ECNA114_2013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ena03021
]
ECNA114_2013
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ena02035
]
ECNA114_2013
Transcription machinery [BR:
ena03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ECNA114_2013
Bacterial motility proteins [BR:
ena02035
]
Flagellar system
Flagellar assembly proteins
Stator
ECNA114_2013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
UPF0147
UPF0122
TFIIE_alpha
SapB_1
Motif
Other DBs
NCBI-ProteinID:
AEG36840
LinkDB
All DBs
Position
complement(2005888..2006577)
Genome browser
AA seq
229 aa
AA seq
DB search
MDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYDALQGTAFTTY
AVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAIGQLEQELGRNATETEVAERLGIDIAD
YRQMLLDTNNSQLFSYDEWREEHGDSIELVTDDHQRENPLQQLLDNNLRQRVMEAIETLP
EREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggataaacactcgctgtggcagcgttatgtcccgctggtgcgtcacgaagcattgcgc
ctgcaggttcgactgcccgcgagcgtggaacttgacgatctgctacaggcgggcggcatt
gggttacttaatgccgtcgaacgctatgacgccctacaaggaacggcatttacaacttac
gcagtgcagcgtatccgtggcgctatgctggatgaacttcgcagccgtgactgggtgccg
cgcagcgtgcgacgcaacgcgcgtgaagtggcacaggcaatagggcaactggagcaggaa
cttggccgcaacgccacggaaactgaggtagcggaacgtttagggatcgatattgccgat
tatcgccaaatgttgctcgacaccaataacagccagctcttctcctacgatgagtggcgc
gaagagcacggcgatagcatcgaactggttactgatgatcatcagcgagaaaacccgcta
caacaactgctggacaataatctgcgccagcgggtgatggaagccatcgaaacgttgccg
gagcgcgaaaaactggtattaaccctctattatcaggaagagctgaatctcaaagagatt
ggtgcggtgctggaggtcggggaatcgcgggtcagtcagttacacagccaggctattaaa
cggttacgcactaaactgggtaagttataa
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