Escherichia coli NA114 (UPEC): ECNA114_4113
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Entry
ECNA114_4113 CDS
T01998
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ena
Escherichia coli NA114 (UPEC)
Pathway
ena03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ena00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECNA114_4113 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ena03019
]
ECNA114_4113 (recQ)
03400 DNA repair and recombination proteins [BR:
ena03400
]
ECNA114_4113 (recQ)
Enzymes [BR:
ena01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECNA114_4113 (recQ)
Messenger RNA biogenesis [BR:
ena03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECNA114_4113 (recQ)
DNA repair and recombination proteins [BR:
ena03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ECNA114_4113 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AEG38957
LinkDB
All DBs
Position
4236672..4238507
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AA seq
611 aa
AA seq
DB search
MNVAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQ
IPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQISL
LYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFM
ALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKS
GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGM
GINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQG
QLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQI
ALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIH
LGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAK
LRKLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMAL
IRAHVDGDDEE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgtggcgcaggcggaagtgttgaatctggagtccggagctaaacaggttttacaa
gaaacctttggctaccaacagtttcgccccggccaggaagagattatcgacaccgtactt
tccggtcgcgattgcctggtcgtcatgcccactggtggcggaaaatccctttgctatcaa
atccctgccttattgctaaacggccttaccgtggttgtctcaccgctgatttcgttgatg
aaagatcaggtagatcaactgcaagccaacggcgtggcggcggcgtgccttaactcgacg
caaacccgcgagcagcaacttgaagtgatgacaggctgtcgcaccgggcaaatcagcctg
ctttatatcgcgccggaacgcctgatgctggataactttcttgagcatctggcgcactgg
aatccggtgttattagccgttgatgaggcgcactgtatctcccaatggggtcacgatttc
cgcccggaatacgctgccctcggtcagctgcgtcagcgttttccgacgctgccgtttatg
gcgctgactgccacagccgatgacaccacgcgccaggatatcgtgcgcctgctggggctg
aacgatccgctgattcaaatcagcagttttgaccgtccgaatattcgctacatgctgatg
gagaaattcaaaccgctcgatcagttgatgcgttatgtacaggaacaacgcggtaagtcg
gggattatttactgtaatagtcgtgcgaaagtagaagacaccgctgcgcgcctgcaaagc
aagggaattagcgcggcggcctatcatgccgggctggaaaataatgttcgcgctgatgtg
caggaaaaattccagcgcgatgacctgcaaattgtggtggcgacggtggcgttcggcatg
ggcatcaacaagcctaacgttcgcttcgtggtgcattttgatattccgcgcaatatcgaa
tcctattatcaggaaactggacgcgccgggcgtgatggcctgcccgcggaagcgatgctg
ttttacgatccggctgatatggcgtggctgcgccgttgtctggaagagaagccgcagggg
cagttgcaggatatcgaacgtcataaactcaatgcgatgggcgcgtttgctgaagcgcaa
acttgccgtcgtttggtattgctgaactattttggcgaagggcgtcaggagccgtgcggg
aactgcgatatctgcctcgatccgccaaaacagtacgatggttcaaccgatgcgcagatt
gccctttccaccattggtcgtgtgaatcagcggtttgggatgggttatgtggtggaagtg
attcgcggtgctaataatcagcgtatccgcgactatggtcatgacaaactgaaagtctat
ggcatgggccgtgataaaagccatgaacattgggtgagcgtgatccgccagctgattcac
ctcggcctggtgacgcaaaatattgcccagcattctgccctacaactgacagaggctgcg
cgtccggtgctgcgcggcgaatcctctttgcaacttgccgtgccgcgtatcgtggcgctc
aaaccgaaagcgatgcagaaatcgttcggcggcaactatgatcgcaaactgttcgccaaa
ttacgcaaactgcgtaaatcgattgccgatgaaagcaatgtcccgccgtacgtggtgttt
aacgacgctaccttgattgagatggctgaacagatgccgatcaccgccagcgaaatgctc
agcgttaacggcgttggtatgcgcaagctggaacgctttggcaaaccgtttatggcgctg
attcgtgcgcatgtcgatggtgacgacgaagagtag
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