Enterobacter sp. N18-03635: ELK40_12895
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Entry
ELK40_12895 CDS
T08394
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
enb
Enterobacter sp. N18-03635
Brite
KEGG Orthology (KO) [BR:
enb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
enb03016
]
ELK40_12895
Enzymes [BR:
enb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ELK40_12895
Transfer RNA biogenesis [BR:
enb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ELK40_12895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
AZV05990
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All DBs
Position
2549971..2551905
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRV
MAVIHTEKDRESAEPEELIEPFLTRFVGKVQRKDDRLSIVPDHPLLKDAIPCRAARGVEH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFGADHFVPWWVTLARHNLEKEAPNGVAT
EMQDEGLTRRDLTALEFVTIDSASTEDMDDALYAEESADGKLHLTVAIADPTAWIAEGSK
LDDAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRPNEVRPVLACRMTIAADGAIEDDIEF
FAAIIESKAKLAYDNVSDWLENTGSWKPDSDAIAAQIRLLHRICLNRGEWRKTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEEAMISANICAARVLRDKLGFGIYNVHTGFD
PANTEALAALLKNHDVHVDPEEVLTLPGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGETIARPQEDTTQQMADRRRLNRM
AERDVGDWLYARFLQDKAGTDTRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
MVCSQENGTVQIKGETVYKVTDVIDVNIAEVRMETRSIIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgtgcagaaggggtcgtaaaagccacggaaaagggctttggcttccttgaggttgacgcg
cagaaaagctacttcattccgcctccgcagatgaagaaagtgatgcatggcgatcgcgtc
atggccgtcattcataccgagaaggaccgcgagtctgccgagccggaagaactgatcgaa
ccgttcctgacccgttttgtgggtaaggtacagagaaaagacgatcgtctttctatcgtg
ccggatcatcccctgctgaaagatgctattccctgccgcgccgcccgtggcgttgagcat
gattttaaagaaggtgactgggccgtagcagaaatgcgccgtcatcctctgaaaggcgat
cgcggtttttatgctgaactgacccagttcatcacctttggcgccgaccatttcgtgcca
tggtgggtcacgctggcacgccataatcttgaaaaagaagcgccgaacggcgtagcgacc
gagatgcaggatgagggtctgacccgtcgcgatctcaccgcgctggagtttgtcaccatc
gacagcgccagcacagaagatatggatgacgcgctgtacgctgaagagagcgccgacggc
aaactgcatctgaccgttgccattgccgatcccaccgcatggattgccgagggcagcaag
ctggatgacgcggcgaaaatccgtgcgttcaccaactacctgccgggcttcaatattccg
atgctgccgcgcgaattgtcagacgatctctgctcgctgcgtccaaatgaagtgcgcccg
gtccttgcctgccgcatgactatcgccgcagatggcgcgattgaagacgatatcgagttc
ttcgccgccattatcgagtcgaaagccaagctggcctacgataacgtctccgactggctg
gaaaataccggtagctggaaacctgattccgacgccattgccgcgcagatccgtctcctg
catcgcatctgcctgaaccgcggcgagtggcgtaaaactcacgcgctggtgttcaaagac
cgcccggactatcgctttgttctgggcgagaaaggcgaagtgctggacatcgtggccgaa
ccgcgacgcattgcaaaccgcatcgttgaagaggcgatgatttccgccaacatctgtgcc
gcacgcgtgctgcgcgacaaactgggctttggcatttacaacgttcacaccgggtttgac
ccggcaaataccgaagcgctggcggccctgctgaagaatcacgatgtgcacgttgatccg
gaagaagtgctgacgctgccgggcttctgcaagcttcgccgcgaactggacgcgcaaccg
tcaggcttcctggacagccgcattcgtcgcttccagtccttcgctgaaatcagcaccgag
cctgggccgcactttggtctcggcctcgaagcctacgccacctggacatcgccgatccgt
aagtatggcgatatggttaaccaccgtctgctgaaagcgattatcaaaggtgaaaccatt
gcccgtcctcaggaggacaccacgcagcaaatggccgatcgtcgccgtctgaaccgcatg
gcggaacgtgacgttggggactggctgtacgcacgcttcctgcaggataaagccggtacg
gatacccgtttcgccgcagagatcatcgatatcagccgcgggggcatgcgcgtccgcctg
gtcgataacggtgctgtcgcgtttattcctgcgccgttcctgcatgcggttcgcgacgaa
atggtctgtagtcaggaaaatggtaccgtgcaaatcaaaggtgaaacagtttacaaagtc
accgacgtgattgacgttaatatcgccgaagtccgcatggaaacccgcagtattatcgcg
cgtcctgtcgcctga
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