Enterobacter sp. N18-03635: ELK40_17140
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Entry
ELK40_17140 CDS
T08394
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
enb
Enterobacter sp. N18-03635
Brite
KEGG Orthology (KO) [BR:
enb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
enb03009
]
ELK40_17140 (srmB)
Enzymes [BR:
enb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ELK40_17140 (srmB)
Ribosome biogenesis [BR:
enb03009
]
Prokaryotic type
rRNA helicases
ELK40_17140 (srmB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
DUF561
AAA_30
AAA_11
LuxC
CMS1
Motif
Other DBs
NCBI-ProteinID:
AZV06775
LinkDB
All DBs
Position
3462700..3464028
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLNALESKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAANTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RNQTMLFSATLEGEAIKDFAERLLEDPVEVSATPSTRERKKIHQWYYRADNLEHKVELLK
HLLKQEDALRTIVFVRKRERVHELAEMLRNAGINNCYLEGEMAQIKRTEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGIAISLVEAHDYLLL
QKIGRYVDEPLKARVIDGLRPTTRAPSEKMTGKPSKKALAKRAERKEKEKEKPRVKQRHR
DTKNIGKRRKPSSAAPETKTEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagcctgctcaatgcacttgag
agcaaaggctttacacgcccgaccgccattcaggcagcggccattccgcctgcgcttgag
ggccgcgatgtgctcggttctgcgccaaccggcacggggaagacagcagcctatttgctg
cctgtgttgcagcatctgctcgactttccgcgtaaaaaatctggcccgccgcgtatttta
atcctgacgccgacgcgcgaactggccatgcaggtggccgatcacgcgcgtgaacttgcg
gcaaatacccatctggatatcgcgaccatcaccggcggcgttgcgtatatgaaccacgcc
gaagtgttcagcgaaaaccaggacatcgtcgttgcgacgacgggccgcctgctgcagtac
attaaagaagagaacttcgactgccgtgcggttgaaacgctgatcctcgacgaagccgac
cgtatgctggacatgggcttcgcacaggatatcgagcatattgcgggtgaaacgcgctgg
cgtaaccagacgatgctgttctctgccaccctcgaaggggaagcgattaaagacttcgca
gagcgtctgctggaagatccggtagaagtgtcggcgacgccgtccacccgtgagcgtaag
aagatccaccagtggtactaccgcgcggacaaccttgagcacaaggtcgaattgctcaaa
cacctgctgaagcaggaagatgcgctgcgcacaatcgtgtttgtccgtaagcgcgagcgc
gtgcacgagctggcagaaatgctgcgtaacgccgggatcaacaactgctatcttgaaggc
gagatggcgcagatcaagcgtaccgaaggcattaagcgcctgaccgatggccgcgttaac
gtgctggttgccacagacgtggccgctcgcgggatcgacatccctgacgtcagccacgtc
attaacttcgatatgccgcgcagcggcgatacctatctgcaccgtattggccgtaccggc
cgcgcgggccgcaaagggattgctatctcactggttgaagcgcatgactacctgctgctg
cagaaaattggccgctatgttgacgagccgctgaaagcgcgcgttattgatggcctgcgc
ccaaccacgcgtgcgccgagtgaaaaaatgacgggtaaaccgtccaagaaagcgctcgcg
aaacgtgctgagagaaaagagaaagaaaaagagaaaccgcgcgtgaagcagcgccaccgc
gacaccaagaatattggtaagcgacgtaagccaagctctgccgcaccagagacgaaaact
gaagagtaa
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