Enterobacter sp. N18-03635: ELK40_18535
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Entry
ELK40_18535 CDS
T08394
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
enb
Enterobacter sp. N18-03635
Pathway
enb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
enb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ELK40_18535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enb03400
]
ELK40_18535
Enzymes [BR:
enb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ELK40_18535
DNA repair and recombination proteins [BR:
enb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ELK40_18535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
bDLD3
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AZV07027
LinkDB
All DBs
Position
complement(3723565..3727107)
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AA seq
1180 aa
AA seq
DB search
MTDTAESLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGNAAFPRPLSVEELL
VVTFTEAATAELRGRIRTNIHELRIACLRQSTDNPLYASLLEEIADKQQAAQWLLLAERQ
MDEASVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESVLRYQACADFWRRHCYPLQRDIA
EAVHALWKGPEALLRAIDRYLQGEAPVIKSPPPADETLASRHEKIIAKIADIKQKWMESV
GEIAAIIENSGIDRRKFNRGNQGKWIDKISAWAQEETRGYQLPDALEKFSQRFLAERTKA
DGIVPEHTLFVAIETLLADNLTLNDLMIARAMTEIREAVAREKRRRGELGFDDMLSRLDA
ALCSENGEALAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRQQPGTALLLIGDPKQAIY
AFRGADIFTYMKARSEVDAHYTLDTNWRSSPGMVESVNALFSRMDTAFMFREIPFQPVKF
APKNASLRFEFNGVTQPAMNFWLLDGEGCGVADYQNAMAQHCAAQIRDWLSAGARGEALL
WKGDNPTPVKASDITVLVRSRQEAALIRDALTLLNIPSVYLSNRDSVFETLEAQEMLWLL
QAVLAPERESTLRSALASAMLGLNARDIDALNNDEAAWDAVVEEFVRYREKWQKRGVMAM
VRELMAQRHIAENMLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLAQQIADPNS
NSSSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIANYRVQDQAFYHDRESFEAVLDL
SNAESSVELAEAERLAEDLRLLYVALTRSVWHCSLGVAPLFRRRGEKTGESDFHLSALGR
LIQQGEPKDAAGLRQCIESLCTEHVALHIPSLPDNSRWHMPDPHESDLHARQVVRTIADD
WRVTSYSGLQQHGQSIAQDLMPKLDVDAAGAGSVPAEPVLTPHQFPRGASPGTFLHSLFE
ELDFTQPVSEEWVLKMLQSGGYDAQWQPVLTDWIRAVLHAPLTTQGISLNQLTAKDKQVE
MEFYLPIASPLRAEALDALIREYDPLSAGCPPLNFRQVQGMLKGFIDLVFRHEGRYYLLD
YKSNWLGDSSEAYTQQAMASAMQLHRYDLQYQLYTLALHRYLRHRMANYRYEAHFGGVIY
LFLRGVDANDPRSGIFSTRPAEELIEKMDNLFAAGTEEVA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgctgagtcccttgatcccttacgtttacctctgcagggtgaacgattg
attgaagcctcagcgggaacgggaaaaaccttcaccattgccgccctctatctgcgtctg
ctgctggggcttggcggcaacgcagcttttccacgccctttgagcgtggaagagctgctg
gtggtcaccttcaccgaggccgctaccgcggagctgcggggccgtattcgtaccaatatc
cacgagctgcgcatcgcctgtctgcgtcagagcacggataaccctctctacgccagcctt
ctggaagagattgccgataagcagcaggcagcccagtggctgctgctcgctgaacggcag
atggacgaagcgtccgtctttaccattcacggtttttgccagcgtatgctgagcctgaat
gcgttcgagtccggaatgctgttcgaacagcagctcattgaagatgaatccgtgcttcgc
tatcaggcctgcgcggatttctggcgtcgccactgctatcccttacagcgtgatattgcc
gaagcggtacacgcgctctggaaaggcccggaagcgctgctgcgcgcgatcgatcgttat
ctccagggtgaagcgccggtaatcaaatccccgccgccggcagatgaaaccctggcctcg
cggcatgaaaaaatcatcgcgaaaattgcggacatcaagcaaaaatggatggagtcagtc
ggtgagattgccgccatcatcgaaaattccggcatcgatcgtcgcaagttcaaccgcggc
aatcaggggaaatggatcgacaagatcagcgcctgggcgcaggaagagacgcggggctat
cagctcccggacgcgctggagaaattctcccagcgtttcctggctgagcggaccaaagcc
gacggcattgtgcctgagcataccctgtttgtggcaatagaaaccctgctggcggataac
cttacgctcaacgatctgatgatcgctcgcgccatgaccgaaattcgcgaagccgtggcg
cgcgagaaacgccgccggggtgaactgggtttcgacgatatgctgagccgccttgatgcg
gcgctgtgcagtgaaaacggcgaagcgcttgccgccgcgattcgcacccgcttcccggtt
gcgatgatagacgaatttcaggacaccgaccctcagcagtaccgcattttccgccgtatc
tggcgccagcagcccggtaccgcgctgttgttaatcggcgatccgaaacaggccatctac
gccttccgcggggcggatattttcacctatatgaaagcccgcagcgaggttgacgcacac
tacacgctcgataccaactggcgctcctctcccggcatggtggaaagcgtcaacgcgctc
tttagccgcatggatacggcgtttatgtttcgggaaatcccgtttcagccggtaaaattt
gccccgaaaaatgcctcgctgcgcttcgagtttaacggcgtgacgcagcctgccatgaac
ttctggctgctggatggggaaggctgcggcgttgccgactatcaaaatgccatggcccag
cactgtgctgcgcaaatccgtgactggctcagtgccggggcgcggggcgaggcgctgctg
tggaagggggataaccccaccccggtaaaggcatcggatattacggtgctggtgcgcagc
cgtcaggaggccgcattaatccgagacgccctgacgttactgaatattccctccgtctat
ctatcgaaccgtgacagcgtctttgaaacgcttgaggcgcaagagatgttatggctgctc
caggccgtgctggccccggagcgggaaagtacattgcgtagcgcattagccagcgcgatg
ctcggactgaacgcgcgggatatagatgcgctcaacaatgacgaagccgcgtgggatgct
gtggtagaggagtttgtgcgctaccgcgaaaaatggcagaagcgtggagttatggcgatg
gtgcgcgagctcatggcacagcgccacattgcggagaatatgctggctaccgcaggcggc
gagcgtcgtttgaccgatattttgcacatcagcgaactcttgcaggaagccggtacgcag
ctggagagcgagcacgccctggtgcgatggctggcgcagcagattgccgatccgaacagc
aattcatccagccagcagatgcgcctcgagagtgataaacatctggtgcagatcgtcacc
attcacaagtcgaaaggcctggaatatccgctggtctggctgccgtttatcgccaattac
cgcgtgcaggatcaggctttttaccacgatcgcgaatcttttgaggcggtgctcgatctc
agcaacgcggagtccagcgttgagctggccgaagccgagcgtctggcggaagacctgcgc
ctgctttacgtggcgctgacccgttcggtatggcactgcagcctgggcgttgcgccgctg
ttccgtcgccgtggtgaaaagaccggggagagcgattttcatctgagcgcgctggggcgg
cttattcaacagggtgagcccaaagacgcggcgggcctgcgccagtgcatcgaatcgctt
tgcactgagcatgttgccctgcatattccatcgctgcccgataacagccgctggcacatg
ccggatccgcacgagtcagatctccatgcccgtcaggtggtacgtaccattgccgacgac
tggcgcgttaccagctactccggcttacagcagcacgggcagagtattgcgcaggatctg
atgccaaaactggacgtggatgccgcaggcgccggtagcgtgccggctgagcctgtgctg
acgccgcaccagttccctcgcggcgcttctccgggcacgtttttgcacagcctgtttgaa
gagctagatttcacccagccggtttccgaagagtgggtgctgaagatgttacagagcggt
ggttacgacgcacagtggcagccggttctcaccgactggatccgcgcggttctgcacgcg
ccgctcacgacgcaggggatttcgctgaatcagttgaccgccaaagataagcaggtggag
atggagttttatctccccatagccagcccgctcagggccgaggcgcttgatgcgctgatc
cgcgagtacgatccgctatctgccggatgcccgccgctgaacttccgccaggtgcagggg
atgctcaaaggctttatcgacctggtttttcgccacgaaggacgctactacctgctggat
tacaaatcgaactggctcggtgacagcagcgaagcctatacccaacaggcgatggcgtcg
gcaatgcaactgcatcgctacgatctgcagtaccagctttacaccctggcgctgcaccgt
tatctgcgccatcgcatggccaattaccgttacgaagcgcattttggcggcgtgatttac
ctgttcctgcgcggcgtggatgctaacgacccgcgttccggcatctttagtacgcggccg
gctgaggaactgattgaaaaaatggataacctgtttgctgcaggcacggaggaggtggca
tga
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