Enterobacter sp. N18-03635: ELK40_19935
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Entry
ELK40_19935 CDS
T08394
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
enb
Enterobacter sp. N18-03635
Pathway
enb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ELK40_19935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enb03019
]
ELK40_19935
03009 Ribosome biogenesis [BR:
enb03009
]
ELK40_19935
Enzymes [BR:
enb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ELK40_19935
Messenger RNA biogenesis [BR:
enb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ELK40_19935
Ribosome biogenesis [BR:
enb03009
]
Prokaryotic type
rRNA helicases
ELK40_19935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
DRTGG
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AZV07282
LinkDB
All DBs
Position
complement(4007674..4009569)
Genome browser
AA seq
631 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPDG
HQTALFSATMPEAIRRITKRFMKDPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEADLPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSQIQPVAEGEELD
METLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERGGE
DRPRRERRDAGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPDRGGERRGGGRGFGGERREGGRSEGR
GGEGRRFSGERRESRGPRREEGTSRRRFGDA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgtatcccacacctg
ctttctggtcgtgacgtgctgggcatggcccagactggtagcggtaaaactgcagcattc
tcgctgccgctgctgaacaacattgatccggacctgcgtgcaccgcagatcctcgtcctg
gctccaacccgtgaactggctgttcaggttgcagaagcaatgacggaattctctaaacat
atgcgcggcgtaaacgtggtagccctgtacggcggccagcgttatgacgtgcagttacgc
gccctgcgccagggtccacagattgttgtcggtacgccgggccgtctgctggatcacctg
aagcgcggtactctggacctctctaaactgagcggcctggtgctggatgaagcagatgaa
atgctgcgtatgggcttcatcgaagacgtcgaaaccatcatggcgcagatcccggacggt
catcagaccgcgctgttctctgccaccatgccagaagcgattcgtcgtatcaccaaacgc
ttcatgaaagatccgcaggaagtgcgtattcagtccagcgtaaccactcgcccggacatc
agccagagctactggtctgtgtacggcatgcgtaaaaacgaagcgctggtacgtttcctg
gaagcggaagattttgatgcggcgattattttcgttcgcaccaaaaacgcgaccctggaa
gtggctgaagccctggagcgtagcggctataacagcgcagcgctgaacggcgacatgaac
caggctctgcgtgagcagactctggagcgtctgaaagacggtcgtctggatatcctgatt
gcaaccgacgtggcagcacgtggtctggacgttgagcgtatcagcctggttgttaactat
gacatcccgatggattccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgctggccgtgcgctgttgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatc
gaacgcaccatgaagctgaccattccagaagcggacctgccaaacgcagagctgctgggc
aaacgccgtctggaaaaattcgccgctaaagtacagcagcagctggaaagcagcgatctg
gatcagtaccgtgcgctgctgtcgcagattcagcctgttgctgaaggcgaagagctggac
atggaaaccctggccgcagcactgctgaaaatggctcagggcgaacgtagcctgatcgtg
ccaccagatgcaccgatgcgtcctaagcgtgaattccgtgaccgtgacgatcgcttcgaa
cgtcgtggcgaccgtaacgatcgtggcccacgtggtgaccgtccagagcgtggtggtgaa
gaccgtccacgtcgtgaacgtcgcgacgcaggtgacatggaactgtaccgcattgaagtg
ggccgtgatgatggcgttgaagttcgtcacatcgttggcgcgatcgctaacgaaggcgac
atcagcagccgttacattggtaacattaagctgttcgcatcccactctactatcgagctg
ccaaaaggcatgccgggcgaagtgctgcagcactttacgcgtacccgcatcctgaacaag
ccgatgaacatgcagctgctgggtgatgcgcagccacgtcctgaccgtggcggcgaacgt
cgtggcggtggtcgcggtttcggcggtgagcgtcgtgaaggcggtcgcagcgaaggtcgc
ggtggtgaaggccgtcgtttctccggcgagcgccgcgaaagccgtggcccgcgtcgtgaa
gaaggcaccagccgtcgtcgtttcggtgacgcgtaa
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