Enterobacter sp. N18-03635: ELK40_20145
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Entry
ELK40_20145 CDS
T08394
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
enb
Enterobacter sp. N18-03635
Pathway
enb02020
Two-component system
enb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
enb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ELK40_20145
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ELK40_20145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enb03021
]
ELK40_20145
Transcription machinery [BR:
enb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ELK40_20145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Baculo_19
Motif
Other DBs
NCBI-ProteinID:
AZV07320
LinkDB
All DBs
Position
4045938..4047371
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AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALDSNPLLEQTDLHDEVDTQQ
SQDTEALDTADALEQKEMPDELPLDASWDEIYTAGTPSGTRADYQDDELPVYQGETTQSL
QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVTLDDILESMGDEEIELEEVEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFSKETPWLDEARVIISDHLDLLANHDFRTLMRVTR
LKEDVLKEAVNLIQSLDPRPGQSIQTSEPEYVIPDVLVRKHNGRWVVELNSDSIPRLQIN
QQYASMCTSVRNDSDNQYIRSNLQEARWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
YMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTTMLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaattaaggctcagccaacaactggcgatgacgccgcagctacag
caggcaattcgcctgttgcaactgtccacgttagaacttcagcaggagctccagcaggcg
ctggacagcaaccccctgctggaacaaaccgatcttcatgacgaggtagatactcagcag
tcacaggacactgaagcgcttgataccgccgacgcactcgaacaaaaagagatgcccgac
gagcttccgctggatgccagctgggatgaaatctacaccgccggaacgccttccggtacg
cgtgcggactaccaggatgatgagctaccggtctatcagggagaaaccacccagtcgctg
caggattacctgatgtggcaggtggaactcactcccttctccgataccgaccgcgcgatt
gccacctcaattgtcgatgccgttgacgacaccggctatttgaccgtcacgcttgacgat
attctggaaagcatgggcgacgaagagatagagcttgaggaagttgaagccgttctgaag
cgcatccagcgtttcgatccggtaggcgtagccgcaaaagatctgcgcgactgcctgcta
atccagctttctcagttcagcaaagagacgccatggctcgacgaggcgcgcgtgattatc
agcgatcacctggatctgctggcgaaccacgatttccgcaccctgatgcgcgtcacgcgc
ctgaaagaagatgtgctgaaagaagcggtgaatctgatccagtcactcgatccacgcccg
ggacagtcaatccagaccagcgagcctgagtacgttattccggacgtgctggtcagaaaa
cacaatggccgctgggtcgttgaactgaattcagacagcatccctcgcctgcaaatcaac
cagcagtatgcctccatgtgcaccagcgtgcgtaacgactccgacaatcaatatattcgt
agcaatcttcaggaagcgcgatggctgatcaaaagtcttgagagccgaaatgatacgctg
ctacgcgtcagccgctgtattgtcgaacagcagcaggctttctttgagcagggcgaagag
tatatgaaaccgatggtgctggcggatatcgcccaggccgtcgagatgcatgaatcaacc
atttcccgtgtcaccacgcagaagtatctgcatagtccacgcggtatttttgagcttaag
tatttcttctccagccatgtgaataccgagggcggcggcgaagcgtcgtcaacggccatt
cgtgccctggtgaagaagttgatcgccgcggagaaccccgcgaagccgctaagcgacagt
aagttaaccaccatgctgtccgatcagggtattatggtggcacgtcgtactgttgcgaag
tatcgagagtctttatccattccgccgtccaaccagcgtaaacagctggtctga
DBGET
integrated database retrieval system