KEGG   Enterobacter sp. N18-03635: ELK40_20145
Entry
ELK40_20145       CDS       T08394                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
enb  Enterobacter sp. N18-03635
Pathway
enb02020  Two-component system
enb02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:enb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ELK40_20145
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ELK40_20145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:enb03021]
    ELK40_20145
Transcription machinery [BR:enb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ELK40_20145
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID Baculo_19
Other DBs
NCBI-ProteinID: AZV07320
LinkDB
Position
4045938..4047371
AA seq 477 aa
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALDSNPLLEQTDLHDEVDTQQ
SQDTEALDTADALEQKEMPDELPLDASWDEIYTAGTPSGTRADYQDDELPVYQGETTQSL
QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVTLDDILESMGDEEIELEEVEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFSKETPWLDEARVIISDHLDLLANHDFRTLMRVTR
LKEDVLKEAVNLIQSLDPRPGQSIQTSEPEYVIPDVLVRKHNGRWVVELNSDSIPRLQIN
QQYASMCTSVRNDSDNQYIRSNLQEARWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
YMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTTMLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaattaaggctcagccaacaactggcgatgacgccgcagctacag
caggcaattcgcctgttgcaactgtccacgttagaacttcagcaggagctccagcaggcg
ctggacagcaaccccctgctggaacaaaccgatcttcatgacgaggtagatactcagcag
tcacaggacactgaagcgcttgataccgccgacgcactcgaacaaaaagagatgcccgac
gagcttccgctggatgccagctgggatgaaatctacaccgccggaacgccttccggtacg
cgtgcggactaccaggatgatgagctaccggtctatcagggagaaaccacccagtcgctg
caggattacctgatgtggcaggtggaactcactcccttctccgataccgaccgcgcgatt
gccacctcaattgtcgatgccgttgacgacaccggctatttgaccgtcacgcttgacgat
attctggaaagcatgggcgacgaagagatagagcttgaggaagttgaagccgttctgaag
cgcatccagcgtttcgatccggtaggcgtagccgcaaaagatctgcgcgactgcctgcta
atccagctttctcagttcagcaaagagacgccatggctcgacgaggcgcgcgtgattatc
agcgatcacctggatctgctggcgaaccacgatttccgcaccctgatgcgcgtcacgcgc
ctgaaagaagatgtgctgaaagaagcggtgaatctgatccagtcactcgatccacgcccg
ggacagtcaatccagaccagcgagcctgagtacgttattccggacgtgctggtcagaaaa
cacaatggccgctgggtcgttgaactgaattcagacagcatccctcgcctgcaaatcaac
cagcagtatgcctccatgtgcaccagcgtgcgtaacgactccgacaatcaatatattcgt
agcaatcttcaggaagcgcgatggctgatcaaaagtcttgagagccgaaatgatacgctg
ctacgcgtcagccgctgtattgtcgaacagcagcaggctttctttgagcagggcgaagag
tatatgaaaccgatggtgctggcggatatcgcccaggccgtcgagatgcatgaatcaacc
atttcccgtgtcaccacgcagaagtatctgcatagtccacgcggtatttttgagcttaag
tatttcttctccagccatgtgaataccgagggcggcggcgaagcgtcgtcaacggccatt
cgtgccctggtgaagaagttgatcgccgcggagaaccccgcgaagccgctaagcgacagt
aagttaaccaccatgctgtccgatcagggtattatggtggcacgtcgtactgttgcgaag
tatcgagagtctttatccattccgccgtccaaccagcgtaaacagctggtctga

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