Enterobacter sp. N18-03635: ELK40_21685
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Entry
ELK40_21685 CDS
T08394
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
enb
Enterobacter sp. N18-03635
Pathway
enb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ELK40_21685 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enb03019
]
ELK40_21685 (recQ)
03400 DNA repair and recombination proteins [BR:
enb03400
]
ELK40_21685 (recQ)
Enzymes [BR:
enb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ELK40_21685 (recQ)
Messenger RNA biogenesis [BR:
enb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ELK40_21685 (recQ)
DNA repair and recombination proteins [BR:
enb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ELK40_21685 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AZV07596
LinkDB
All DBs
Position
complement(4358153..4359982)
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AA seq
609 aa
AA seq
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MAQAEVLNQESLAKQVLHETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVP
ALVLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQIRLLY
IAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMAL
TATADDTTRLDIVRLLGLNDPYIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGI
IYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKAL
STIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKEQSHEHWVSIIRQLIHLG
FATQNIAQHSALQLTEAARPVLRGDVELKLAVPRVIALKPRVMQKSYGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKEFMALIR
SHADGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtattgaatcaggagtcgctggctaaacaggttttgcatgaaacc
tttggctaccagcagttccgccctggccaggaaaccatcattgaaacggtgctggaaggt
cgtgattgcctggtggtgatgcctaccggtggcggcaagtccctctgttatcaggtgccc
gcgctggtgcttaacggcctgacggtcgtggtatcccccctcatttctctaatgaaagac
caggttgaccagctactcgccaacggagtggcggcggcctgtctcaactcgacccaaacc
cgggagcagcagcaagaggtcatggccgggtgccgcaccgggcagatccgcctgctgtat
atcgcgccggaacgcctgatgctggataacttccttgaccacctggcgcactggaacccg
gtcctgctggcggtggatgaagcgcactgtatctcccagtggggacacgatttccgcccg
gaatacgccgccctcggccagctgcgtcagcgcttccccgagctgccgtttatggcgctt
accgccacggcggatgacaccacgcggctggatatcgttcgcctgctcgggctgaacgac
ccctatatccaggtcagcagcttcgaccgccccaacatccgctacatgctgatggaaaaa
ttcaagccgctggatcagctcctgcgctacgtccaggagcagcgcggcaagtccggcatc
atctactgcaacagccgtgcaaaggtggaagacaccgccgcgcgtctgcaaaaccgcggc
tttagcgccgccgcctatcacgccggattagagaaccacatccgtgccgacgtgcaggaa
aaattccagcgcgatgacctgcagatcgtggtcgcgacggtggcgtttgggatggggatc
aacaagcccaacgtgcgcttcgtggtgcatttcgacattccgcgcaatatcgaatcctac
tatcaggaaaccggccgcgccgggcgcgacggcctgcctgcggaagcgatgctgttttac
gatccggccgatatggcgtggctgcgccgctgtctggaagagaagccgcagggacagctg
caggatatcgagcgccacaagctcaacgcgatgggcgcgtttgccgaagcgcaaacctgc
cgtcgtctggttctgctcaactactttggtgaagggcgacaggagccgtgcggcaactgc
gatatctgcctggatccgccgaaacagtacgatggcctgatggacgcgcgtaaggcgctc
tcgaccatttaccgcgtgaaccagcgcttcgggatgggctacgtggtggaggtgctgcgc
ggtgccaataaccagcgtatccgcgatatgggccacgataagctgccggtctacggtatt
ggcaaggagcagagccacgagcactgggtgagtattattcgccagctgatacacctcggc
ttcgccacgcagaacattgcccagcactccgccctgcagctgaccgaggcggcgcgcccg
gtcctccgcggtgacgttgagctcaagctcgccgtgccgcgcgtcatcgccctgaagccg
cgcgtgatgcagaaatcctacggcggcaactacgaccgcaagctgttcgccaaactgcgc
aagctgcgtaaggccatcgccgacgaagaaaacatcccgccttacgtggtgttcaacgac
gcgacgctgattgagatggccgagcagatgccgcttagcgccagcgagatgctcagcgtc
aacggcgtggggacgcgcaagctggagcgcttcggtaaagagtttatggcgctcattcgc
tctcacgccgacggcgacgatgaagagtag
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