Enterobacter sp. N18-03635: ELK40_21870
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Entry
ELK40_21870 CDS
T08394
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
enb
Enterobacter sp. N18-03635
Pathway
enb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ELK40_21870 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enb03019
]
ELK40_21870 (rhlB)
Enzymes [BR:
enb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ELK40_21870 (rhlB)
Messenger RNA biogenesis [BR:
enb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ELK40_21870 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AZV07625
LinkDB
All DBs
Position
4394267..4395535
Genome browser
AA seq
422 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPKVIEALENKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKIGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPQSKYNPEALLSELPPPKRLTRPRSGNGPRRSGGAPRNRRR
SG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacatttaacagaacagaagttttccgacttcgcgctgcacccgaaggtg
attgaagcccttgaaaataaagggtttcataactgcacgcccattcaggccctcgcgctg
ccgctgacgctggccggtcgcgatgttgccgggcaggcgcaaaccggtaccggcaaaacg
atggcgtttttaacgtcaacgtttcattatttactttctcacccagcgattgcagaccgc
aaagttaaccagccgcgcgcgctaattatggccccgacgcgagaactggcggtacagatc
cacgcagacgctgaacccctggcgcaggctacgggcctgaagattggcctggcctacggc
ggcgacggctacgataaacagctgaaagtgctcgaaagcggtgtggatatcctgatcggt
accaccggccgtcttatcgattacgccaaacagaaccacattaacctcggtgccatccag
gttgtggtgctcgatgaagctgaccgcatgtacgatctcggcttcattaaagacattcgc
tggctgttccgccgtatgcctccggccaatcagcgtctgaatatgctgttctctgcaacc
ctctcataccgcgtacgcgaactggcattcgaacagatgaacaacgccgaatatgtagaa
gtggaacctgagcagaaaacgggtcaccgcattaaagaagagctcttctatccttccaat
gaagagaaaatgcgtctgctgcaaacgctgattgaagaagagtggccagatcgcgccatc
atctttgcgaacaccaaacatcgttgtgaagacatctggggccatctggctgcagacggt
caccgtgttggcctgttgaccggcgacgtcgcacagaaaaaacgcctgcgtattttggaa
gagttcacccgtggcgatctcgatattctggtcgcaaccgacgtggcggcacgtggttta
cacattccagccgtgacgcatgtctttaactacgatctgccagacgactgcgaagactac
gtacaccgtatcggtcgtaccggtcgcgcgggcgcaagcggacactctattagccttgca
tgtgaagagtatgcgctgaatctcccagccattgagacttatatcggtcactctatcccg
cagagcaaatacaatccggaagcgctgttaagcgaactgccgccgcctaagcgtctaacc
cgcccacgctccggcaatggtccgcgtcgttcaggcggcgcaccgcgtaatcgtcgtcgt
tcaggttaa
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