Enterobacter cloacae subsp. cloacae ATCC 13047: ECL_02552
Help
Entry
ECL_02552 CDS
T01231
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
enc
Enterobacter cloacae subsp. cloacae ATCC 13047
Pathway
enc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECL_02552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enc03019
]
ECL_02552
03009 Ribosome biogenesis [BR:
enc03009
]
ECL_02552
Enzymes [BR:
enc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ECL_02552
Messenger RNA biogenesis [BR:
enc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ECL_02552
Ribosome biogenesis [BR:
enc03009
]
Prokaryotic type
rRNA processing factors
ECL_02552
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
PNPase_C
S1
DUF4775
Arr-ms
Motif
Other DBs
NCBI-ProteinID:
ADF62095
UniProt:
A0A0H3CKF5
LinkDB
All DBs
Position
2598951..2602055
Genome browser
AA seq
1034 aa
AA seq
DB search
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPLKEIAREYFPANYNAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPDGMGLIVRTAGVGKSAEAL
QWDLSFRLKHWEAIQKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA
RQHIAALGRPDFTSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDTTEALT
AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE
NRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLS
LSILRLIEEEALKENTKEVHAIVPVPIASYLLNEKRAAVSAIEARQGGVRCIIVPNDQME
TPHYHVLRVRKGEETSTLSYLLPKLHEEEMALPSDEEPAERKLPEQPALATFIMPEAPPE
SALEKPAAKPAAQKPAVAAKAEPAQPGLLSRFFGALKKMFAGEEVQPEQPKEEPKAAKPE
RQQDRRKRQNNRRDRNDRSDRNERRDNRSDNNEGREQREDNRRNRREKQQQNVEDREIRQ
QAGDESEKSKQRDEQQPRRERNRRRNDEKRQAQQDVKNLNREEPAEQQETEQEERTQVMP
RRKQRQLSQKVRVGAVQAEETAAVAAEVTETTTGTQVAKVDLPAVVENQVEQDENGENRD
NAGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPMTVACASPEMASGKVWIRYPVAR
PKQAVEEQAVTEEVIAPAPAAAVEEVVTEAANVVEPQVVETEAPHAVDVETTHPEVIAAP
VDAAPQLIAEEDAVVAEEVAEEAEPVAAVEETAETIVETTTEEVVQDVEIQVEPVVEEAK
APEVKPEPVKVAVAPAHVATAPMTRAPAPEYVPEAPRHSDWVRPEFNFEGKGAAGGHSAT
HKATAPATRPQSVE
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttaatcaacgcaactcagcaagaagagttgcgtgtcgcccttgtggat
gggcagcgcctgtacgatctggatatcgaaagtcctggacacgaacagaaaaaagcgaac
atttacaaaggtaaaatcacccgcattgaaccaagccttgaggctgcatttgttgattac
ggtgctgagcgtcatggtttcctccctctgaaagaaatcgcccgcgaatatttccctgct
aactacaacgctcatggccgtccgaatatcaaagatgttctgcgtgaaggtcaggaagtg
attgttcagattgataaagaagagcgcggcaacaaaggtgccgcactgacaacctttatc
agcctggcgggaagttatctggtactgatgccaaacaacccgcgtgcgggtggtatctct
cgccgtatcgaaggcgatgaccgtaccgaactgaaagaagcgctggccagtcttgaactg
ccggatggcatgggtcttatcgtgcgtaccgccggtgtgggcaaatctgccgaagcgctg
cagtgggacttaagcttccgtctgaagcactgggaagctatccagaaagcagcagaaagc
cgccctgctccgttcctgatccaccaggaaagtaacgttattgtacgtgccttccgcgac
tatctgcgtcaggatatcggtgaaattctcatcgacaacccgaaagtgcttgagctggct
cgccagcacatcgccgcactgggtcgtccggacttcaccagcaaaatcaaactgtacacc
ggtgaaatcccacttttcagccactatcagattgaatcccagattgagtccgccttccag
cgtgaagtgcgtctgccatccggcggttctatcgttatcgataccacagaagcgctgacc
gctatcgacatcaactccgcacgtgcgacgcgcggcggcgatatcgaagagaccgccttc
aacaccaaccttgaagccgctgatgaaatcgcccgccagctccgcctgcgcgacctgggt
ggtctgattgttatcgactttatcgacatgacccctgttcgtcaccagcgtgcggttgaa
aaccgtctgcgcgaagcggtgcgccaggatcgtgcgcgtatccagattagccatatttca
cgcttcggcctgctggagatgtcccgccagcgcctgagcccgtctctgggcgaatccagc
catcacgtttgcccgcgctgctccggtaccgggaccgttcgtgataacgaatctctgtct
ctctctattctgcgtctgattgaagaagaagcgctgaaagagaacaccaaagaggttcac
gccattgttccggtgccaattgcctcctacctgctgaacgaaaaacgtgccgcagtgagt
gccattgaagcgcgccagggcggcgttcgctgcatcatcgtgccaaacgaccagatggaa
acgccgcactatcacgtgctgcgtgtccgtaaaggcgaagagaccagcacactcagctac
ctgctgccgaagctgcatgaagaagagatggcgctgccatctgatgaagagccagccgag
cgtaaactgccagagcagcctgcattagcgaccttcatcatgccggaagctccgccagaa
agtgccctggaaaaaccagcggctaaacctgcggcacaaaaaccggcagtggcggcaaaa
gccgagccagcacaaccgggtctgctgagccgtttctttggcgcgctgaagaaaatgttc
gcaggtgaagaagttcagccagagcagccgaaagaagaacctaaagcggctaaacctgag
cgtcagcaggaccgtcgtaagcgtcagaacaaccgccgcgatcgtaatgaccgcagcgac
cgtaacgagcgtcgtgacaaccgttcggacaacaatgaaggccgtgagcaacgcgaagac
aaccgtcgcaaccgtcgcgagaaacaacagcagaacgttgaagatcgtgaaattcgccag
caggcgggcgatgagtccgagaagagcaaacagcgcgacgagcagcagcctcgccgtgag
cgtaaccgtcgccgtaacgacgaaaaacgccaggcgcagcaggacgttaaaaacctgaat
cgcgaagagcctgctgagcagcaggagaccgagcaggaagaacgtactcaggttatgcca
cgtcgtaagcagcgccagctgtctcagaaagtgcgcgtcggtgctgttcaggcagaagaa
accgcagctgtcgcagccgaagtgacagaaaccacaacgggcacgcaggttgcgaaagtt
gacctcccggccgtcgtggaaaatcaggtagagcaggatgaaaacggtgaaaaccgtgac
aacgcgggtatgccgcgtcgctcgcgccgttctccgcgtcatctgcgcgtgagcggtcag
cgtcgtcgtcgctaccgtgacgagcgttacccaacgcagtccccaatgccaatgaccgtg
gcgtgcgcgtcacctgaaatggcatccggtaaagtctggatccgctaccctgttgctcgc
ccgaaacaggctgttgaagaacaggcagtgaccgaagaggtgattgcaccagcaccagca
gcagcggtagaagaggttgtaacggaagcggcaaacgtggttgaaccacaggttgttgaa
actgaagcacctcacgctgtggacgtcgaaaccacccatccagaagtgattgccgcgccg
gttgatgccgcgccgcagcttattgccgaagaagatgccgtggtggctgaagaagtcgct
gaagaggctgaacctgtagccgcagtggaagaaaccgctgaaaccatcgttgaaaccacg
accgaagaggttgtgcaggacgttgagattcaggttgaacctgttgttgaagaagcgaaa
gcgccggaagtgaaacccgagccggtgaaggttgccgtcgcgcctgcgcacgttgccaca
gcaccgatgactcgcgcccctgcgcctgagtatgtgcctgaagcaccgcgtcacagcgac
tgggttcgcccggagttcaacttcgaaggtaaaggtgctgccggtggtcacagtgctacg
cacaaggctactgcaccagcaacccgtccgcagtcagttgaataa
DBGET
integrated database retrieval system
