Enterobacter cloacae subsp. cloacae ATCC 13047: ECL_02938
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Entry
ECL_02938 CDS
T01231
Name
(GenBank) putative ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
enc
Enterobacter cloacae subsp. cloacae ATCC 13047
Pathway
enc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECL_02938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enc03019
]
ECL_02938
Enzymes [BR:
enc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ECL_02938
Messenger RNA biogenesis [BR:
enc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECL_02938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ADF62474
UniProt:
A0A0H3CPJ8
LinkDB
All DBs
Position
complement(2985382..2986734)
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AA seq
450 aa
AA seq
DB search
MSFDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
ELLVKNQPHAKGRRPVRALILTPTRELAAQIGENVRDYSRYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDNVEILVLDEADRMLDMGFIHDIRRVLAKLPPR
RQNLLFSATFSDDIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKRELLSHMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIETPGYEVDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRAEGGAPKS
GNKPPRRDGEGKPAGEGQRRRRPRKPANPQ
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaacccggaaattctgcgcgcgatcgcagagcagggc
tacgttgagccaaccccaatccagcagcaggcgatccctgccgttctgcagggccgtgac
ctgatggccagtgcccagaccgggaccggtaaaaccgcaggcttcaccctgccactgtta
gagctgctggtaaaaaatcagccgcacgcgaaggggcgtcgcccggttcgtgcgctgatc
ctcaccccaacccgcgagctggcggcgcagattggcgagaacgtgcgtgattacagccgc
tatctcaacattcgttcgctggtggttttcggcggtgtgagcattaacccacagatgatg
aaactgcgcggcggcgtggacgtgctggtggcaacgccgggccgtctgctggatctggaa
catcagaacgccgtgaagctagataacgtcgaaattctggtgctggacgaagccgaccgc
atgctggacatgggctttatccacgatattcgccgcgtgctggctaagctcccgccgcgc
cgtcagaacctgctgttctccgcgaccttctccgacgatatcaaagcgctggctgaaaag
ctgctgcataacccgctggaagttgaagtggcgcgccgcaacaccgcctctgagcaggtg
acccagcacgtgcacttcgttgataaaaagcgtaagcgggaactgctctcccatatgatt
ggtcagggtaactggcagcaggtgctggtctttacccgtaccaagcacggtgcaaaccac
ctggcggaacagctgaacaaagacggtattcgcagtgcggctatccacggtaacaagagc
cagggggcgcgtacccgtgcgctggcggactttaaatccggtgatatccgcgtgctggtg
gccaccgacatcgctgcccgtggtctggacattgaagagctgccgcacgtggtgaactac
gagctgccaaacgtgccggaagactatgttcaccgtatcggccgtaccggtcgtgcggcg
gccactggcgaagcgctctcgctggtctgcgtggatgaacacaaactgctgcgcgatatc
gaacgtctgctgaagaaagagatcccgcgtattgaaacgccgggatacgaagtggatccg
tccattaaagcggagccaattcagaatggtcgccagcagcgtggcggcggtggacgcggt
cagggcggcggccgtggtcagcagcagccacgccgtgccgaaggcggcgcgccgaagtcg
ggcaataaaccgcctcgccgcgacggcgaagggaaaccggcaggagaagggcagcgccgt
cgccgtccgcgtaaaccggctaacccacagtaa
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