Enterobacter cloacae subsp. cloacae ATCC 13047: ECL_04973
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Entry
ECL_04973 CDS
T01231
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
enc
Enterobacter cloacae subsp. cloacae ATCC 13047
Pathway
enc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECL_04973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enc03019
]
ECL_04973
03400 DNA repair and recombination proteins [BR:
enc03400
]
ECL_04973
Enzymes [BR:
enc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECL_04973
Messenger RNA biogenesis [BR:
enc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECL_04973
DNA repair and recombination proteins [BR:
enc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ECL_04973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ADF64495
UniProt:
A0A0H3CUZ7
LinkDB
All DBs
Position
complement(5095205..5097097)
Genome browser
AA seq
630 aa
AA seq
DB search
MKFLSQALKIAPVSFLAYGVNVAQAEVLNQESLAKQVLHETFGYQQFRPGQETIIETVLE
GRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQ
TREQQQEVMAGCRTGQVRLLYIAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFR
PEYAALGQLRQRFPELPFMALTATADDTTRLDIVRLLGLNDPLIQVSSFDRPNIRYMLME
KFKPLDQLLRYVQEQRGKSGIIYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQ
EKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLF
YDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGN
CDICLDPPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYG
IGKDQSHEHWVSIIRQLIHLGFATQNIAQHSALQLTEAARPVLRGDVELKLAVPRVVALK
PRVMQKSYGGNYDRKLFAKLRKLRKAIADEENIPPYVVFNDATLIEMAEQMPLSASEMLS
VNGVGTRKLERFGKEFMALIRSHVDGDDEE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
ttgaagtttctctctcaggcgctgaaaatagcgcctgtttcatttctggcatatggggtt
aacgtggcgcaggcggaagtattgaatcaggagtcgctggctaaacaggttttgcatgaa
acctttggctaccagcagttccgtcctggccaggaaaccatcattgaaaccgtgctggaa
ggccgtgattgcctggtggtaatgccgaccggtggcggtaaatcgctctgctatcaggtg
cccgcgctggtacttaatggcctgacggtcgtggtatcgccgctgatttctctgatgaaa
gaccaggttgaccagctgctcgccaacggcgtggcggcggcctgtcttaactccacgcaa
acccgcgagcagcagcaagaggtgatggccggttgccgtaccggacaggttcgcttgctg
tatatcgcaccagaacggttgatgctggataacttcctcgaccatctggcgcactggaat
cccgttctgctggccgttgatgaagcacactgtatctcgcagtggggccacgatttccgc
ccggaatatgcggcacttggtcagctgcgtcagcgcttccctgaactgccgtttatggcg
ctgaccgccacggcagatgacaccacgcggctggatatcgtccgcctgctggggctgaac
gacccgctgatccaggtcagcagcttcgaccgcccgaacatccgctatatgctgatggaa
aaattcaagccgctggatcagcttctgcgctatgtgcaggagcaacgcggcaagtcaggc
atcatctactgcaacagccgcgcgaaggtggaagacaccgctgcgcgtctgcaaaaccgc
ggctttagcgcggcggcctatcatgccgggttagaaaaccacatccgcgccgacgtgcag
gaaaaattccagcgtgatgacctgcagattgtggtggcgacggtggcgttcggcatgggc
attaacaagcccaacgtccgctttgtggtgcacttcgacattccgcgaaatatcgaatcc
tactaccaggaaaccggccgcgccggccgtgatggcctgcctgcggaggcgatgctgttt
tacgatccggccgatatggcgtggctgcgccgctgccttgaagagaaaccgcagggacag
ctgcaggatatcgagcgtcacaaactcaacgccatgggcgcgtttgcggaagcgcagacc
tgccgccgtctggtgctgctcaactactttggtgaagggcgtcaggagccgtgcggcaac
tgcgatatctgtctcgacccgccaaagcagtacgatggcctgatggacgcgcgtaaggca
ctttcgaccatataccgtgttaatcagcgcttcgggatgggctacgtggtggaagtgctg
cgcggcgccaataaccagcgtatccgcgacatgggccacgataagctacctgtctacggt
attggcaaagaccagagccacgagcattgggtcagcattattcgtcagttgattcacctc
ggttttgccacacagaacatcgcccagcactccgcgcttcagctcaccgaagccgcgcgc
ccggtgctgcgaggggatgttgaactcaagctcgccgtgccgcgcgtagtggccctgaaa
ccgcgggtgatgcagaaatcctacggcggcaactacgaccgcaagctgtttgccaaactg
cgtaagctgcgtaaagcgattgccgatgaagagaacattccgccatatgtggtcttcaac
gacgcgacgctgatcgagatggccgagcagatgccgctcagcgccagcgaaatgctgagc
gtcaacggcgtgggcacgcgcaagctggagcgctttggtaaagaattcatggcgctcatc
cgttcacatgtcgatggtgatgatgaggagtag
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