Enterobacter sp. ODB01: A4308_01245
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Entry
A4308_01245 CDS
T06363
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
end
Enterobacter sp. ODB01
Pathway
end03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
end00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A4308_01245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
end03400
]
A4308_01245
DNA repair and recombination proteins [BR:
end03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4308_01245
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A4308_01245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_23
AAA_25
nSTAND3
Viral_helicase1
ExoX-like_C
ScfRs
Motif
Other DBs
NCBI-ProteinID:
AMZ75705
LinkDB
All DBs
Position
263638..266460
Genome browser
AA seq
940 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVREDLATRLAESFETALELSGGTAVVSDMDDP
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL
SLAGGAIRGWDKRNFYYFQMLKSLAEHYKFDVEAPWASLSPNVHKVILFGSGKENIEFKY
MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRSCATCEGTRLRREARH
VFVENTALPTISDMSIGHAMDFFNNLKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLVHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGQVVAEGTLKDIMAVPESLTGQYMSGKRKIEV
PKQRVAADPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQT
ALNGATLAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
ARSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPLL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcgaagttcggggcgcccgcacccacaatctcaaaaatatcaacctcata
atccctcgcgacaaactcatcgtcgtgaccgggctttcggggtctggcaaatcctcactg
gctttcgacaccttgtatgccgaaggacagcgtcgttacgttgaatctctctccgcgtac
gcgcgtcagttcctgtcgctgatggaaaaaccggatgtcgatcatattgaagggttatcg
cctgcgatctccatcgagcagaagtcgacttcgcataacccgcgttcaacggtcggtacc
attactgaaattcatgactacctgcgtctgctgtttgcgcgcgtgggtgagccgcgctgc
ccggaccacgacgtcccgctggcggcgcagaccgtgagccagatggtggataacgtgctg
tcgcagccggaaggcaaacgcctgatgctgctggcgccaattattaaagagcgtaaaggc
gaacacaccaaaacgctggagaacctggcaagccagggctatatccgcgcccgtattgac
ggcgaagtgtgcgacctgtcggatccgccaaaactggagctgcagaaaaagcacaccatt
gaagtggtgatcgatcgctttaaggtgcgtgaagacctcgcgacgcgtcttgcggaatcg
ttcgaaacggcgctggaactctccggtggtaccgccgttgtttccgatatggacgacccg
aaagcggaagagctgctcttctccgccaactttgcctgcccgatttgcggctacagcatg
cgcgagctggaaccgcgtctgttctcgttcaacaacccggcaggcgcatgcccaacctgc
gacggcctgggcgtacagcagtatttcgacccggaccgcgtgatccagaaccctgagctg
tcgctggcaggcggcgccattcgcggctgggataagcgtaacttttactacttccagatg
ctgaaatcgctggcggagcactataagttcgacgttgaagcgccgtgggccagcctgagc
ccgaacgtgcacaaagtgatcctgttcggttccggtaaagagaacatcgagttcaaatac
atgaacgatcgtggtgatacctccgtgcgtcgccacccgttcgaaggggtgctgcacaat
atggagcgccgctacaaagagaccgaatccagcgcggtacgcgaggagctggcgaagttc
atcagcaaccgctcctgtgccacctgtgaaggcacgcgtctgcgtcgcgaagcgcgtcat
gtctttgtcgaaaacacagcgctgccgaccatctcagacatgagcatcggccacgcgatg
gacttcttcaacaacctgaagctctccggtcagcgcgcgaaaatcgctgaaaaagtgctg
aaggagattggcgatcgtctcaagttcctggtgaacgtgggtctgaactacctgacgctt
tcccgctcggcagaaacgctgtccggcggtgaggcccagcgtatccgcctggccagccag
attggcgcgggcttagtcggcgtgatgtacgtgctggatgagccgtcaatcggcctgcac
cagcgcgacaacgaacgtctgctcggcacgttggtccacctgcgcaacctcggtaacacg
gtgattgtggtggagcacgacgaagacgcgattcgcgctgcggatcacgtgatcgacatt
ggtcctggcgcgggcgtacacggcggtcaggtggtcgcggaagggacgctgaaagacatt
atggcggtacccgagtcgctgaccggccagtacatgagcggcaagcgtaagattgaggtg
ccaaaacagcgcgtagcggcagatccggaaaaagtgctgaagctgaccggcgcgcgcggc
aacaacctgaaagatgtgacgctgacgctaccggttggcctgtttacctgcatcactggc
gtgtccggttccggtaaatcgacgctgattaacgataccctgttcccgattgcgcagacg
gcgctgaacggtgcgacgctggccgagcccgcgccgtaccgagacattcaggggctggaa
catttcgataaggttatcgacattgaccagagcccgattggccgaacccctcgctcgaac
ccggcgacctataccggcgtcttcacgcccgtacgtgaactgttcgccggcgtgccggaa
gcgcgttcacgcgggtacacgccgggacggttcagctttaacgtgcgcggcggccgctgt
gaagcgtgccagggcgatggcgtcatcaaagttgagatgcacttcctgccggatatctac
gtcccgtgcgaccagtgcaaaggtaaacgctataaccgcgaaacgctggaaattaagtac
aaaggcaagaccatccacgaagtgctggacatgaccatcgaagaggcgcgcgagttcttt
gacgccgtccctgcgctggcacgtaagctgcagaccctgatggacgtcggtctgacctac
attcgtctggggcagtccgccactacgctgtcgggcggtgaagcccagcgcgtgaagctg
gcgcgtgagctctccaaacgcggcaccggtcagacgctgtatattctggatgagccgact
accggtctgcactttgcggatatccagcagttgctcgacgtgctgcatcagctgcgcgat
cagggcaacacgattgtggtcatcgaacataatctggacgtgattaaaaccgcggactgg
attgtcgatctcggcccggaaggcggcagcggcggcggtgaaatcctcgtctccggtacg
ccagagaccgttgcagagtgcgaagcctcgcacaccgcgcgcttccttaaaccgttgctg
taa
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