Enterobacter sp. ODB01: A4308_02695
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Entry
A4308_02695 CDS
T06363
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
end
Enterobacter sp. ODB01
Pathway
end03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
end00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A4308_02695 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
end03400
]
A4308_02695 (recB)
Enzymes [BR:
end01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A4308_02695 (recB)
DNA repair and recombination proteins [BR:
end03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A4308_02695 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AMZ75976
LinkDB
All DBs
Position
complement(561026..564568)
Genome browser
AA seq
1180 aa
AA seq
DB search
MTDTAESLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGNAAFPRPLSVEELL
VVTFTEAATAELRGRIRTNIHELRIACLRQITDNPLYASLLEEIADKQQAAQWLLLAERQ
MDEASVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESVLRYQACADFWRRHCYPLPRDIA
EAVHALWKGPEALLRAIDRYLQGEAPVIKSPPPANETLASRHEKIIARIADIKQKWNESV
GEIEAIIESSGIDRRKFNRGNQGKWIEKISAWAREETRGYQLPDALEKFSQRFLVERTKA
DGIVPEHPLFVAIETLLAEPLTLNDLMITRAMTEIRDAVAREKRRRGELGFDDMLSRLDA
ALCSENGEALAEAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRHQPGTALLLIGDPKQAIY
AFRGADIFTYMKARSEVDAHYTLDTNWRSSPGMVESVNALFSRMDMAFMFREIPFLPVKF
APKNDSLRFEFNGETQPAMHFWLLDGEGCGVADYQNAMAQYCAAQIRDWLSAGARGDALL
WKGDKPAPVKASDITVLVRSRQEAALIRDALTLLNIPSVYLSNRDSVFETLEAQEMLWLL
QAVLAPERESTLRSALASAMLGLNARDIDVLNNDEAAWDAVVEEFVRYREKWQKRGVMAM
VRELMAERHIAENMLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLAQQIADPNS
NSASQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIANYRVQDQAFYHDRESFEAVLDL
SNAESSVELAEAERLAEDLRLLYVALTRSVWHCSLGVAPLFRRRGDKSGESDFHLSALGR
LIQRGEPKDAAGLRQCIESLCSEHVALHIPSQPDNSRWQTPEQRASELHARQVARTIADD
WRVTSYSGLQQHGQSVAQDLMPKLDVDAAGAGSVPAEPVLTPHQFPRGASPGTFLHSLFE
ELDFTQPVSEEWVLKMLQSGGYDAQWQPVLTDWLRAVLHAPLTTQGISLSQLTAKDKQVE
MEFYLPIASPLRADALDALIREYDPLSAGCPPLNFRQVQGMLKGFIDLVFRHEGRYYLLD
YKSNWLGENSEAYTQQAMASAMQMHRYDLQYQLYTLALHRYLRHRLADYRYEDHFGGVIY
LFLRGVDANDPQSGVFSTRPDAELIEKMDNLFAARTEEVA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgctgagtcccttgatcccttacgtttacctctacagggtgaacgattg
attgaagcctcagcgggaacgggaaaaacgtttaccattgccgcgctctatctgcgcctg
ctgttagggcttggcggtaacgctgcttttccgcgccctttgagcgttgaagagctgttg
gtcgtgacctttaccgaggccgccaccgctgagttgcgcggccgtattcgtaccaatatt
cacgaactgcgcatcgcctgcctgcgccagattacggataaccctctctacgctagcctt
ctggaagaaattgctgataagcagcaggccgcccagtggctgctccttgcggaacgacag
atggacgaagcgtccgtcttcaccattcacgggttttgccagcgcatgctgagcctgaat
gcgttcgaatccggcatgctgtttgaacaacaactcattgaagatgaatccgtgctgcgc
tatcaggcctgtgcggatttctggcgtcggcactgctacccgttaccgcgcgatatcgcc
gaagcggtacatgccttgtggaaagggccagaggcactgctgcgcgccatcgatcgttat
cttcagggggaagcgccggtcatcaaatcgccgccgccagcgaatgaaaccctggcctca
cgccatgaaaaaatcatcgcgcgaatcgcagacatcaagcaaaaatggaatgaatcagtc
ggcgagattgaggcgatcatcgagagttccgggatcgacagacgcaagttcaaccgtggc
aaccagggaaaatggatcgagaagatcagcgcatgggcgagggaagagacgcgcggttat
cagcttcctgacgcgctggagaaattctcacagcgtttcctggttgagcggaccaaagcc
gacggcattgtgcctgaacatcccctgtttgtggcaattgaaactctgctggcggagccc
ctgacgcttaacgatctgatgatcacccgtgcgatgacggaaattcgcgatgccgtggcg
cgcgaaaagcgccggcggggcgagctggggtttgatgacatgctgagtcgccttgatgcg
gcgttgtgcagcgaaaatggcgaagcgcttgcagaggcgattcgtactcgcttcccggtc
gcaatgattgacgagtttcaggataccgaccctcagcagtaccgtattttccgccgtatc
tggcgccatcagcccggcaccgcactgctgttaatcggcgatccgaagcaggccatttac
gctttccgcggtgcggatattttcacctacatgaaagcccgcagtgaggttgatgcgcac
tatacgctcgataccaactggcgatcctctcccggcatggtggaaagcgttaacgcgctg
ttcagtcgcatggatatggcgtttatgttccgggaaatcccgtttctgccggtcaaattt
gccccgaaaaacgattcgttgcgcttcgaattcaacggtgagacgcagcccgccatgcac
ttctggctgctggacggcgaaggctgtggcgtcgccgactatcaaaatgccatggcccag
tactgtgcggcgcagattagggactggctcagcgcaggcgcgcggggagatgcgctgctg
tggaagggcgataaacccgcgccggtaaaagcatccgatatcacggtgctggtgcgaagc
cgccaggaggccgcgcttattcgcgacgccctgacgctactgaatattccgtccgtctat
ctttcaaaccgcgacagcgtttttgaaacgctggaagcccaggagatgctttggctgctg
caggccgtgctggcgccagagcgtgaaagtacgctgcgcagtgcactggcgagtgcgatg
ctcgggctgaatgcgcgtgatattgatgtgctcaacaatgacgaagccgcgtgggatgcc
gtggtagaagagtttgttcgctaccgcgaaaaatggcaaaagcgcggcgtgatggcgatg
gtgcgcgagctcatggcagagcgtcacattgcggagaacatgctcgcaaccgcgggcggt
gagcgccgtctgaccgatattctgcatatcagcgaattgctgcaggaagcggggacacag
ctggagagcgagcatgccctcgtgcgctggctggcgcagcagattgccgacccgaacagt
aattcggccagccagcagatgcgtcttgagagtgataaacacctggtgcaaatcgtcacc
attcacaaatctaaaggcctggaatatccgctggtctggctgccctttatcgccaattac
cgcgtgcaggatcaggctttttaccacgatcgcgagtcgtttgaagcggtactcgatctc
agcaacgcagagtcaagcgttgagctggccgaagccgagcgtctggcagaagatctgcgt
ctgctttatgtggcgctgacccgctcggtctggcactgcagcctgggcgttgcgccgctg
tttcgtcgccggggcgataagagcggcgagagtgattttcatctgagtgcgctgggaagg
cttatccagcgaggcgaacccaaagatgctgccggtctgcgccagtgcatcgaatctctt
tgctcagagcatgttgccctgcatattccgtctcagcccgacaacagccgctggcagacg
ccggaacagagagcgtcagagctgcatgcccgccaggttgcccgcacgattgccgacgac
tggcgcgttaccagttactccggtttacagcagcacgggcaaagcgttgctcaggatttg
atgcctaaactggatgtagatgccgcaggcgcaggaagcgtgcccgctgaaccggtgctc
acgccgcatcagttcccgcgtggggcctcgccgggcacgtttttacacagcctgtttgaa
gagctggattttacccagccggtctctgaagaatgggtgctgaagatgctccagagcggc
ggctacgacgcccaatggcagccggttctcaccgactggctccgcgctgttttgcacgcg
ccgctcacgacacaggggatttccctcagccagctgaccgccaaagataaacaggtcgaa
atggagttttatctccccattgccagcccgctcagggccgacgcgcttgacgcattgatc
cgtgagtacgatccgttatccgccggttgcccaccgctcaacttccgccaggttcagggg
atgctaaaaggattcatcgacctggttttccgccacgaagggcgctactacctgctggat
tacaaatcgaactggctgggtgagaacagcgaagcctatacccaacaggcgatggcctca
gcgatgcaaatgcatcgctacgacctgcagtatcagctctataccctggcgttgcaccgg
tacctgcgccatcgcttggccgattaccgttacgaagaccattttggcggcgttatttat
ctgttcctgcgcggtgtagatgctaacgacccgcagtcgggtgttttcagcacccgtccg
gatgcggagctgattgaaaaaatggataacctgtttgctgcacgcacagaggaggtggca
tga
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