Enterobacter sp. ODB01: A4308_02930
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Entry
A4308_02930 CDS
T06363
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
end
Enterobacter sp. ODB01
Pathway
end03410
Base excision repair
end03430
Mismatch repair
end03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
end00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A4308_02930
03430 Mismatch repair
A4308_02930
03440 Homologous recombination
A4308_02930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
end03400
]
A4308_02930
DNA repair and recombination proteins [BR:
end03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
A4308_02930
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A4308_02930
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A4308_02930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AMZ76020
LinkDB
All DBs
Position
complement(616177..617910)
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AA seq
577 aa
AA seq
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MKAPIKLRRREAVEPVDLPDDLPPLLKRLYASRGVRSAEDLERSVKGMLPWQQLNGIEKA
IEMLYNALREGTRIVVVGDFDADGATSTALSVLSLRALGCDNVTYLVPNRFEDGYGLSPE
VVDQAHARGAQMIMTVDNGISSHAGVDHAHALGIPVLVTDHHLPGETLPDAEAIINPNLR
DCDFPSKSLAGVGVAFYLMLALRTLLRDKGWFESRGIAIPNLAEYLDLVALGTVADVVPL
DTNNRILTWQGLSRIRAGKCRPGIKALLEIANRDPLKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQAEALTLCEKLERSGETLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
GLMIKFGGHAMAAGLSLEEAKFDEFQRLFGELVTDWIDPALLQGEVVSDGELSPHEMTMD
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRIVGERHLKVMVEPVGGGPLLDGIAFNVDTA
IWPDNGVREVELAYKLDINEFRGNRTLQIIIDNIWPI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagccccgataaaattgcgccgccgcgaggcggttgaaccggttgatttgccagac
gatctcccgcccctgctgaagcgtctctacgccagccgcggcgtgcgcagtgctgaggat
cttgaacgcagcgtcaaagggatgctgccctggcagcagctcaacggcatcgaaaaagcc
atcgaaatgctctacaacgcgctccgtgagggaacgcgtattgtggtggtaggggatttc
gatgcagatggcgcaaccagtacggccttgagcgtattgagtctgcgcgcgctgggctgc
gataacgtcacttaccttgtgccgaaccgctttgaagacggttacggcctcagcccggaa
gtggtcgatcaggctcacgcccgcggggcacagatgatcatgaccgttgataacgggatc
tcttcccatgcaggtgtcgatcatgcgcacgcgctggggatcccggtgttggtcaccgat
caccacttgccgggtgaaacattgccggacgctgaagcgatcatcaatcccaacctgcgc
gactgcgatttcccgtcaaaatctctcgccggtgtgggggtagcgttttatctgatgctg
gcgctgcggaccctgcttcgtgataagggctggttcgaatcacgcggtatcgccatacca
aacctggccgaatatctcgacctggtggcgctgggtaccgtcgcggatgtcgtgccgctc
gataccaataaccgtattttgacctggcagggcttaagccgcattcgcgcgggcaagtgc
cgtccggggattaaggcgctgctggaaattgccaaccgcgatccgctcaagctggcggca
agtgatttgggttttgccctcgggccgcgtctgaacgctgccggaaggctggacgatatg
tccgtcggtgtggcgctgctgctgtgcgataacatcggcgaagcgcgcgtcctggccaat
gagctcgacgcgttgaaccagacccgtaaagagatagagcagggaatgcaggccgaagcg
ctgaccctttgcgaaaaactcgaacgcagcggtgaaacgctgccgggcgggctggcgatg
tatcatcctgagtggcatcagggtgtggttggcattctggcctcgcgcattaaagagcgc
ttccaccgcccggtgatcgcgtttgccccggctggtgacggcacgctgaaaggctctggc
cgttcgattcagggtcttcacatgcgtgatgcactggagcgtctggatacgctgtacccg
ggcctgatgatcaaatttggcggccatgcgatggcggcgggtctgtcgctggaagaggcg
aaatttgacgaatttcagcggctatttggtgaactggtcaccgactggattgaccctgcc
ttgttgcagggagaagtggtgtccgacggcgagctctcaccgcatgagatgacaatggac
gtggcgcagatgctgcgcgatgccggtccgtggggacagatgttccctgaaccgctgttc
gacggccgtttccgcctgcttcagcaacgtatcgtcggcgagcgtcatctgaaagtcatg
gttgagcccgttggcggcggaccgctgctggacggcatcgccttcaacgtcgatacggcc
atctggccggacaacggcgtgcgcgaggtcgaactggcatacaaactggatatcaacgag
tttcgcggaaaccgcacccttcagatcatcatcgacaatatctggccaatttag
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