Enterobacter sp. ODB01: A4308_06360
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Entry
A4308_06360 CDS
T06363
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
end
Enterobacter sp. ODB01
Pathway
end03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
end00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4308_06360 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
end03021
]
A4308_06360 (rho)
03019 Messenger RNA biogenesis [BR:
end03019
]
A4308_06360 (rho)
Transcription machinery [BR:
end03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
A4308_06360 (rho)
Messenger RNA biogenesis [BR:
end03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A4308_06360 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AMZ76651
LinkDB
All DBs
Position
complement(1320203..1321462)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENQARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
FDKPENSRNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaaat
atggggctggaaaaccaggctcgtatgcgcaagcaggacatcattttcgccatcctgaag
cagcatgctaagagtggcgaagatatctttggcgacggtgtgttggagatattgcaagac
ggatttggtttcctccgctctgcagacagctcctacctcgccggccctgacgacatctac
gtatcccccagccaaatccgccgtttcaacctccgcactggtgacaccatttcaggtaag
attcgtcctcctaaagagggtgaacgctactttgcgctgttgaaagtcaatgaagttaac
tttgacaagccagaaaactcacgtaacaagatcctctttgagaacttaacgcctctgcac
gcgaactctcgcctgcgcatggagcgtggtaatggttcaacggaagatttaaccgcgcgt
gttctggatctggcatcgccaattggtcgcggccaacgtggtctgattgtggcaccgcca
aaagcgggtaaaacgatgctgctgcagaatatcgcgcagagcatcgcctataaccacccg
gactgcgtactaatggtactgctgattgacgaacgtccggaagaagtgaccgagatgcag
cgtctggttaaaggtgaagtggttgcttctacctttgacgaacccgcctctcgtcacgtt
caggtcgcggaaatggttatcgagaaggcgaaacgcctggttgagcacaagaaagacgtg
atcatcctgctcgactccattacccgtctggcacgtgcttacaacaccgtggttccggct
tccggtaaagtactgaccggtggtgtggacgccaacgccctgcaccgtccgaaacgcttc
ttcggtgcggcacgtaacgtcgaagagggcggcagcctgaccatcatcgcaacggcgctg
atcgataccggctccaaaatggacgaagtgatttacgaagaatttaaaggtacaggtaac
atggaactgcacctttctcgtaagatcgctgaaaaacgcgtcttcccggcaatcgactac
aaccgttccggtacccgtaaagaagagctgctcactacccaggaagagctgcagaaaatg
tggatcctgcgcaaaatcatccatccaatgggtgaaatcgacgcaatggaattcctcatt
aacaaactggcgatgaccaaaacgaacgacgatttcttcgatatgatgaagcgctcgtaa
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