Enterobacter sp. ODB01: A4308_16670
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Entry
A4308_16670 CDS
T06363
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
end
Enterobacter sp. ODB01
Brite
KEGG Orthology (KO) [BR:
end00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
end03016
]
A4308_16670
Enzymes [BR:
end01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
A4308_16670
Transfer RNA biogenesis [BR:
end03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A4308_16670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
AMZ78555
LinkDB
All DBs
Position
3519435..3521369
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRV
MAVIHTEKERESAEPEELIEPFLTRFVGKVQRKDDRLSIVPDHPLLKDAIPCRAARGVEH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFGDDHFVPWWVTLARHNLEKEAPNGVAT
EMQDEGLTRRDLTALEFVTIDSASTEDMDDALYAEESADGKLHLTVAIADPTAWIAQGSK
LDETAKIRAFTNYLPGFNIPMLPRELSDDLCSLRPNEVRPALACRMTIAADGTIEDDIEF
FAATIESKAKLAYDNVSDWLENTGSWKPESDAIAAQIRLLHRICLKRGEWRTTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEEAMISANICAARVLRDKLGFGIYNVHTGFD
PANTEALAALLKNHDVHVDPEEVLTLPGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGETIARPQDDTTVQMAERRRLNRM
AERDVGDWLYARFLQDKAGTDTRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQESGTVQIKGETVYKVTEVIDVTIAEVRMDTRSIIARPAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgtgcagaaggggtcgtgaaagccacggaaaagggctttggcttccttgaagttgacgcg
cagaaaagctacttcattccgccaccgcagatgaagaaagtgatgcatggcgatcgcgtc
atggccgtcattcatacagagaaggaacgtgaatccgctgagccggaagaactgattgaa
ccgttcctgacccgctttgtcggtaaggtacagcgaaaagacgatcgtctttctatcgtg
ccggatcatcccctgttgaaagatgccattccctgccgggccgcccgcggcgttgagcat
gattttaaagaaggtgactgggccgtagcagaaatgcgccgtcatcctctgaaaggcgac
cgtggtttctatgcagaactgacgcagttcattacctttggcgatgaccatttcgtcccg
tggtgggtcacgctggcgcgccataatcttgaaaaagaagcgccgaacggcgtagcgact
gaaatgcaggacgaaggtttgacgcgccgcgatctcactgcgctggaatttgtcaccatc
gacagcgccagcacagaagatatggacgatgcgctctacgctgaagagagcgccgatggc
aaactgcatctgaccgtcgccattgccgatcctaccgcctggattgcacaaggcagtaaa
ctggacgaaacggccaaaatccgtgcgtttaccaactacctgccaggctttaacatcccg
atgctgccgcgcgaattgtcagacgatctctgctcgctgcgcccaaatgaagtgcgcccg
gctctcgcctgccgcatgaccatcgccgcggatgggacgattgaagacgatatcgaattc
tttgccgccaccatcgaatccaaagccaagctggcctatgacaatgtctctgactggctg
gaaaacaccggcagctggaaacctgaatccgatgccatcgcggcgcagattcgtctgctg
caccgtatttgcctgaagcgtggcgaatggcgtacaacccacgccctggtgttcaaagat
cgtccggattaccgttttgttctcggtgagaaaggcgaagtgctggatatcgtagccgag
ccgcgacgcattgctaaccgcatcgtcgaagaagcgatgatttccgccaacatttgcgcc
gcacgcgtgctgcgcgacaagctgggctttggtatttacaacgttcacaccggattcgat
ccggccaataccgaagcgctggcggccctgctgaagaatcacgatgtgcatgttgatccg
gaagaagtcctgacgctgccaggattctgcaagcttcgccgcgagctggacgcacagcca
tccggtttccttgatagccgtattcgccgcttccagtccttcgctgaaatcagcaccgaa
ccaggcccgcacttcggcctcggtctggaagcttacgccacctggacatccccaattcgt
aaatatggcgacatggttaaccaccgtctgctgaaagcgattatcaaaggcgaaacgatt
gcacgccctcaggacgacacgaccgtgcagatggcagaacgtcgccgtctgaaccgcatg
gcggaacgtgacgttggagactggctgtacgcgcgtttcctgcaggataaagccggaacc
gacacccgcttcgctgcggagattattgatatcagccgcggcgggatgcgtgtccgtctg
gtggataacggtgctgtcgcctttatccctgccccattcctgcatgccgttcgtgacgaa
ctggtctgtagccaggaaagtggcaccgtgcagattaaaggtgaaacagtttacaaagtc
actgaggtgattgacgtaactatcgctgaagtccgcatggatacccgcagtattatcgcg
cgaccagctgtctga
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