Enterobacter sp. ODB01: A4308_16755
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Entry
A4308_16755 CDS
T06363
Name
(GenBank) DNA topoisomerase I subunit omega
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
end
Enterobacter sp. ODB01
Brite
KEGG Orthology (KO) [BR:
end00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
end03032
]
A4308_16755
03400 DNA repair and recombination proteins [BR:
end03400
]
A4308_16755
Enzymes [BR:
end01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A4308_16755
DNA replication proteins [BR:
end03032
]
Prokaryotic type
DNA Topoisomerases
A4308_16755
DNA repair and recombination proteins [BR:
end03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A4308_16755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Zn_ribbon_LysW
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AMZ78570
LinkDB
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Position
complement(3535676..3538273)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKSADSTSTKGAKKPK
KDERSALVNRMGVNPWHNWDAQYEVLPGKEKVVNELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDDKRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEIDANVTTPGGDALPLQVSH
QNDKPFRPENRDQTMAAVALLEKARYQVLEREDKPTSSKPGAPFITSTLQQAASTRLGYG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGKKYLPESANQFASKEN
SQEAHEAIRPSDVSVLAESLKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLTVGAGDF
RLKARGRILRFDGWTKVMPALRKGDEDRTLPAVNKGDELSLVDLVPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEANFRELMNY
DFTAQMEDSLDEVASHKAEWKKVLDSFFSDFTNQLEKAEKDPEEGGMLPNQMVLTSIDCP
TCGRKMGIRTATTGVFLGCSGYALSPKERCKTTINLVPENEVLNVLEGEDAETNALRAKR
RCKKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECDKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELHRFRDRLPEKLRYLADAPQQDPEGNKTVVRFSRKTKQQYV
AAEKEGKATGWSAFFVDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgtcatcgttgagtccccggcaaaagccaaaacgatcaataagtat
ctgggtaatgactacgtggttaagtccagcgtgggtcatatccgcgatttgccgaccagt
ggctcagccagcaaaaagagcgcagactctacctccaccaaaggggctaaaaagcctaaa
aaggatgaacgtagcgcgcttgtcaaccgcatgggtgttaacccatggcacaactgggat
gcacaatacgaagtgctgcccggaaaagagaaagtcgttaacgagctgaagcagctggct
gaaaaagcagaccacatttatctcgcaaccgaccttgaccgcgaaggggaagccattgca
tggcacctgcgggaagtgatcgggggtgatgacaaacgctacagtcgcgtagtgtttaac
gaaattacaaaaaatgcgattcgtcaggcgtttgagaagcctggcgagctgaacatcgac
cgtgtcaacgcccagcaggcgcgtcgctttatggaccgcgttgtaggctatatggtctct
ccactgctgtggaaaaagattgcccgtggcctgtccgcaggacgtgtgcaatccgtcgcc
gtgcgtcttgtcgttgagcgtgaacgcgaaattaaagccttcgtgccggaagaattctgg
gaaattgacgccaatgtgaccacgccgggcggtgacgctctgccactgcaggtgagccat
cagaacgataagcctttccgtcctgaaaaccgtgaccagaccatggctgccgtcgcgttg
ctggaaaaagcacgctatcaggtgctggaacgtgaagataaaccgaccagcagtaaacct
ggcgcgccgtttatcacgtctaccctgcaacaggcggcgagtacgcgccttggctatggc
gtgaagaaaaccatgatgatggcccagcgcttgtatgaagcgggttacatcacctacatg
cgtactgactcaacgaatctgagccaggatgcggtaaacatggtacgcggttatatcagt
gataacttcggtaaaaaatacctgccggaaagcgccaatcaattcgccagcaaagagaac
tctcaggaagcgcacgaagcgattcgtccttctgatgtctctgtgttagccgagtcgctg
aaagatatggaagccgatgcccagaagctgtatcagctgatctggcgtcagtttgtcgcc
tgtcagatgacgcctgcgaagtatgactccacgacgctgaccgtcggtgcgggcgacttc
cgtctcaaagcgcgcggtcgtatcctgcgtttcgacggctggacaaaagtcatgcctgcg
ctgcgtaaaggtgatgaagaccgtacgctgccagcggtgaacaagggagatgagctctct
ctggttgatctcgttcctgctcagcacttcaccaagccgcctgcgcgctttagtgaagcg
tcgctggtgaaagagctggaaaaacgcggtattggtcgtccatcgacctacgcgtcaatc
atctcgacgatccaggatcgcggctacgttcgagttgaaaaccgtcgtttctatgcggaa
aaaatgggtgagatcgtcaccgaccgtctggaagctaatttccgcgagttgatgaactac
gatttcaccgcgcaaatggaagacagcctcgacgaggttgccagccataaggcggagtgg
aagaaggttctcgacagcttcttcagcgattttaccaaccagcttgaaaaagcggagaaa
gatcctgaagagggcggcatgctgcctaaccagatggttctgaccagcatcgactgccca
acctgcggccgcaagatgggtattcgtacggcaaccacgggcgtcttccttggctgttcc
ggctatgcgctgtcgccaaaagagcgctgcaaaaccaccatcaacctggtgccggagaac
gaagttctcaacgtgctggaaggtgaggatgcggaaaccaacgctctgcgagctaaacgc
cgctgcaaaaaatgcggcacggcgatggacagctacctgatcgatcctaaacgtaagctg
cacgtctgcggtaataacccaacgtgtgacgggtatgagattgaggaaggtgaattccgc
attaaaggctatgacggcccgattgtggagtgcgacaagtgtggctctgaaatgcacctg
aaaatggggcgtttcgggaagtacatggcgtgcaccaacgacgagtgtaaaaacacgcgc
aaaattctgcgtaacggtgaagtggctccgccgaaggaagatccggttccgttgccagag
ctgccgtgtgaaaaatccgacgcgtacttcgtgctgcgtgatggtgctgcgggtgtcttc
ctggcggccaacaccttcccgaaatcgcgtgaaacacgtgcgccgctggttgaagaactg
caccgcttccgtgaccgtctgccagaaaaactgcgttacctggccgatgcgccacagcag
gatcctgaaggcaataagacggtggttcgctttagccgtaaaacgaagcagcagtacgtg
gcggcagagaaagagggcaaagcgaccggctggtccgccttctttgtcgatggcaaatgg
gttgaaggcaagaaataa
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