Enterobacter sp. ODB01: A4308_17710
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Entry
A4308_17710 CDS
T06363
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
end
Enterobacter sp. ODB01
Brite
KEGG Orthology (KO) [BR:
end00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
end03016
]
A4308_17710
Enzymes [BR:
end01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A4308_17710
Transfer RNA biogenesis [BR:
end03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A4308_17710
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AMZ78752
LinkDB
All DBs
Position
complement(3735978..3737132)
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AA seq
384 aa
AA seq
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MGANKRESDLNYQMITTNDELASLCEVTRDFPAIALDTEFVRTRTYYPQLGLIQMYDGKH
VSLIDPLGITDWTPMRDLLLDTAVTKYLHAGSEDLEVFLNTFGIMPQPLIDTQILAAFSG
RPLSWGFAAMVEEYTGLTLDKSESRTDWLARPLTERQLEYAAADVFYLLPIAGQLMKEAE
ASGWLSAALDECRMTQLRRQEVVDPKDAWRDISNAWQLRTRQLACLQLLADWRLRKARER
DLAVNFVVREEHLWAVARYMPGSLGELDSIGLSGSEIRFHGKTLLALVAKAQALPEDALP
EPLLNLVDMPGYRKAFKDIKALVQNVATESKLSAELLASRRQINQLLNWHWKLKPQNGLP
ELMAGWRGELMADRLNTLLEGYPR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcaaacaaaagagaatccgatttgaattaccagatgatcacgaccaacgacgag
ctggcttcgctgtgcgaagtgacgcgcgactttcctgccatcgctctggataccgagttt
gtccgtacccggacgtactatccgcagctgggtttgattcagatgtatgacggcaagcac
gtctcgctgatcgatccgctcggcatcaccgactggacgccgatgcgtgacctgctgctg
gatacggcagtaacgaaatacctgcacgcaggcagtgaagatctggaagtttttctgaat
acctttggcatcatgcctcagccgctgatcgatacgcagatcctcgcggcttttagcggt
cgtccgctctcctggggctttgccgccatggtggaggagtatacgggcctgacgctggac
aaaagtgaatcccgtactgactggctggcgcgcccgcttaccgaacgtcagctggaatat
gcggcggcagacgtgttttaccttctgccgattgccggacaactgatgaaagaggcggag
gcctccggatggctctctgccgcgctggacgagtgtcgtatgacgcagctgcgtcgccag
gaagtggttgatccgaaagacgcctggcgtgatatcagcaacgcctggcagctgcgtacg
cgtcagctggcgtgcctgcagctgttagcggactggcgtttacgcaaagcgcgcgagcgc
gatctggcggttaactttgtggtgcgcgaggaacatctctgggcagttgcgcgctatatg
ccgggcagcctgggggagctggacagcattgggctttcgggcagtgagatccgtttccac
ggtaaaaccctgctggcgctggtcgcaaaagcgcaggcgttgccggaagatgcgctgccg
gaaccgctgttgaatctggtggatatgccgggttaccgcaaagcgtttaaggatatcaaa
gcgctggtgcagaacgtcgccactgaaagtaagctgagtgctgagctgctggcatcgcgt
cgtcagattaaccagctgctgaactggcactggaagctgaaaccgcagaatggcctgccg
gaactgatggcgggctggcgtggggaattgatggccgatcgtctgaataccctgctggaa
gggtatccgaggtaa
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