Entomospira nematocerorum: PVA44_01970
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Entry
PVA44_01970 CDS
T10560
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
enem Entomospira nematocerorum
Pathway
enem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVA44_01970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enem03019
]
PVA44_01970
Enzymes [BR:
enem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVA44_01970
Messenger RNA biogenesis [BR:
enem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PVA44_01970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
OrgA_MxiK
AAA_22
Mnd1
Motif
Other DBs
NCBI-ProteinID:
WDI34256
LinkDB
All DBs
Position
421914..423626
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AA seq
570 aa
AA seq
DB search
MQFSQFPLDPRLLRGLDLAQYVTCTPVQEATLKAVLEHGKDVYAQSQTGTGKTAAFLIAT
FWHLLKPENHDKFALILAPTRELVVQIEKEAKTLGQFLQFSMAAIYGGVSIERQRQSLLR
KPRIIVATPGRLQDFINQKTISLKNASVLVIDEADRLFDMGFHKDLLRIVKMLPAPQQRL
NLLFSATLNNKVGQLAWEHMNNPESIVIKSEYPTVEGISQHLFHVSRSEKMILLLAVLKQ
ENPESAIIFSNTKAGARQISLRLQRAGYNCALIEGNIPQKKRLDIIAKMKTGKIKFLAAT
DVASRGIHIPNLSLVINFDLPDDAENYVHRIGRTARGTQTTGKAISFACERFVYNLSSIE
KLIKKKIAVTIIDDTLKSIINDILKDNPDQTALSEKTMAGTPQKSSHQGRGYTRKPHHDR
YQHEKKYDHDKRQPPIAARSAGSKHNPRSPKEENPQGTRKAYSGKTHTPHSDRRDHKHSQ
PQDRAVGTGHHSRGETKGSQHRTPRTATTRSTSKPQRTNDHSRSNLSTNSVRTHDIPRNS
EDQSHASYANTQKQKNILNFISKLFHKEGE
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttcacagtttcctctcgatcctcgcctcttacgtggtctggatctcgcacag
tacgtcacatgcacacctgtgcaagaagcaaccctaaaagctgttttagaacatggcaaa
gatgtttacgctcaaagtcaaaccggtacaggtaagacagccgcctttttgattgccacc
ttttggcatctgctaaaaccagagaatcatgataaatttgccctgattcttgctcccact
cgtgagcttgttgttcaaattgaaaaagaagctaagacacttggtcaatttcttcagttt
tctatggctgccatttatggtggtgtctctatcgaacggcaacgccaatcgcttttacgc
aaacccagaattatcgttgcaacaccaggcagactccaagatttcatcaatcaaaaaaca
atttctctcaaaaatgcgagtgttcttgttattgatgaagctgatcgtctctttgatatg
ggttttcataaagatcttttacgcattgttaaaatgcttcctgcaccacagcaacgacta
aacctactctttagtgcaactctgaacaataaggttggccagctagcatgggaacacatg
aacaatccagaaagtattgttataaagtcagagtaccctactgttgaaggcattagtcaa
cacctatttcatgtcagtcgtagtgaaaaaatgatcctccttctagcggttctcaagcaa
gaaaacccagaaagtgccattatttttagtaacaccaaagccggagccagacaaatatcg
ttgcgactgcaacgggctggatataactgtgctctcattgagggaaatattccgcagaaa
aaacgactcgacattatcgctaaaatgaagaccggaaagattaaattcctcgcagcaacg
gatgttgcctctcgtggtatccatattccgaatctttcattagttatcaactttgatctt
cccgatgatgctgaaaactatgttcatagaatcggtagaacagctcgtgggacccaaaca
actggtaaggctattagctttgcatgtgagagattcgtctataatctatcatctattgag
aagctcatcaaaaagaaaatagcagtaaccattatagatgatacgctcaagagtatcatt
aatgatattcttaaagacaatcccgatcaaactgctctcagtgaaaaaaccatggcagga
acccctcaaaaatcatctcatcaaggacgaggttacacgcgtaaaccccatcatgataga
tatcaacacgagaagaaatatgatcacgataagagacaacccccgatagcagcaagatca
gctggatctaagcataatcctcgctcaccaaaagaagaaaatccacaaggcactcgcaag
gcttattcaggcaaaacacatacaccacacagcgataggcgagatcataaacactcccaa
ccccaggatcgagcagttggcactggacaccattcgcgtggggaaactaagggatcacaa
catcgaacaccacgtacagcaacaactcgctctacatcaaaaccccagaggacaaacgat
cactcacgatcaaatctatcaacaaattccgtgagaacacatgatatacctcgtaactca
gaagaccaatcccatgctagttatgctaatacgcaaaagcaaaaaaacattctcaacttt
atttctaaactgttccataaagagggtgaataa
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