Entomospira nematocerorum: PVA44_05470
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Entry
PVA44_05470 CDS
T10560
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
enem Entomospira nematocerorum
Pathway
enem03030
DNA replication
enem03430
Mismatch repair
enem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
enem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVA44_05470 (dnaE)
03430 Mismatch repair
PVA44_05470 (dnaE)
03440 Homologous recombination
PVA44_05470 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
enem03032
]
PVA44_05470 (dnaE)
03400 DNA repair and recombination proteins [BR:
enem03400
]
PVA44_05470 (dnaE)
Enzymes [BR:
enem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PVA44_05470 (dnaE)
DNA replication proteins [BR:
enem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PVA44_05470 (dnaE)
DNA repair and recombination proteins [BR:
enem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PVA44_05470 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WDI33671
LinkDB
All DBs
Position
complement(1160029..1163559)
Genome browser
AA seq
1176 aa
AA seq
DB search
MKYPFIHLHNHSEFSLLDGSIRVEDLAKKAASLNMPAIALTDHGNMFGALYFQKACQKVG
IKPIIGCEVYIAPKGRHIRAKDNRYYHMCLFCMNETGYKNLLYLTSQASIDGFYHRPRID
DDLLQMHHEGLICSSACLGGEIAQHLINNRYDVAKERALFYRDLFGDGHFYLEIQHHGYP
EEDLNRKLMIQLSQETGIPLIATNDIHYLEQEDKETNDILICIGTQRKFHETNRMMAADN
CYFRTAEEMYTLFQDIPEALTNTVELANKCHLVIPESGPVLPHYEIPDTFSNPTEYLRHL
VHTGLKNRYDEVTQKIIDRAEFEIQTIDTMQFSGYFLIVWDFIDWARNAGISVGPGRGSG
AGSIVAYALKITDVDPLKYNLLFERFLNPERISMPDFDIDFNDERRDEVIDYVTKKYGAD
HVAGITTFGTLATKAALKDVARVLDIPFNESLQITKAIDETALPDDGSVKLNVASARQYN
PFLKSLYAKGGHYAKLFDVAAKIEGLTRNIGTHACGKVIGRSPVVDYVPLIFDQKSNSIN
TAFESKIIEDCGLVKMDFLGLKTLSIIDNTVAMIQKLHPEFSINTIPEDDALTFKLFCEG
KTHSIFQFESEGMQKILKDAQPNSIEDLIALNALYRPGPMQFIPEFIKGKKSPNRVKYFH
PSLKEILKPTYGVIVYQEQVMQVAQVYAGYSLGGADLLRRAMGKKKKEEMDKQQQIFIEG
AIANGHSKESAAELFQILLPFAGYGFNKSHAAAYSILAYQTAYLKAHFPAEFMAANLSND
MDAPKAFIKCIDETRSMGIAIRPPEINHSHEQFTAENGVIYYGLLGIKGLGETAASDIIK
ARSKVGQFTSFLHFLETMAKEKYTLNKRVIETLILAGLFDQIEVERSRSFLRYNHISAID
WAIKLNNMDDDPNQSLFDFKEELSHTPFQYADMPEWEEDEHGNRISYQLSTEETLAFEHD
ILGFYVSGHPLEPYRQEWDAKQSLNLSALDNLNKSTTYTVIGIMKHLQVRPTKKGSLMAS
ATLEDFNGSITIVFFSKLLTDTNNSLLRTREGKAIGVQGKLELDRGSDPQLIVENLFLPT
ENDLSIVVDNGKRDHPPQSVNMFLLEQAISEVSLHALKIALSRQRGNLPVTFFIGGRDGC
SIPIKGIMLSETFFLDPELMELKKSLIEDWEFITAC
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatccgtttattcatttacataaccattcagaattttctctgttagatggatcc
attcgtgtggaggatcttgcaaaaaaagcagcttcgctcaatatgcctgcaatagctctc
acggatcatggcaatatgtttggtgcactttattttcaaaaggcctgtcaaaaagttggt
atcaagccaatcattgggtgtgaagtatatattgcgccaaaaggtcggcatattcgtgcg
aaggataatcgctactatcacatgtgtctgttttgtatgaatgaaaccggctacaaaaac
cttctatacttaacaagtcaggcatctattgatgggttttatcatcgtccacgcatcgat
gatgatttattacaaatgcatcacgagggtcttatctgttctagtgcgtgtttgggtgga
gaaattgctcaacatctcattaataatcgttatgatgtagccaaagaacgggctcttttt
tatcgagatctctttggcgatggtcatttttatctagaaatacaacatcatggctatcct
gaggaggatcttaatcgtaagttaatgatccaactctcacaagaaacggggattcccctt
attgcaacaaatgacatccactatctagagcaagaggataaagaaaccaacgatatatta
atatgtattggaacccagagaaaatttcacgaaaccaatcgcatgatggcagcagataat
tgctattttcgtactgctgaagagatgtatactctattccaagatattcccgaagcatta
accaacacagtagaattagccaataaatgtcatttggtcattcctgagagtggaccggtg
ctgccccattatgaaattcctgatacatttagtaatccaaccgagtatctccgtcacctt
gtccacacaggcttgaaaaatcgatatgatgaagtgacacaaaaaattatcgatcgagct
gaatttgaaattcaaacaatcgataccatgcaattttctggatatttccttattgtatgg
gattttatagactgggctagaaatgcaggtatctccgtagggccaggacgcggttcaggt
gctggatcgattgttgcctatgcactcaagattactgatgtagatccgctcaagtacaat
cttctcttcgagcgatttctcaatcctgagcgcattagtatgcctgactttgatattgac
tttaatgatgagcgtcgtgatgaggtcatcgattatgttacaaaaaaatatggggctgat
catgtggcaggcattacaacgtttggaacacttgcgaccaaagcagccctcaaagatgtt
gcacgagttcttgacattccattcaatgaaagtcttcaaatcacaaaagcaattgatgaa
actgctctcccagatgatggcagtgtgaaactgaatgttgcttccgcacgtcagtataat
cccttcctcaaaagtctttatgctaaaggtggacattatgcaaaactctttgatgttgct
gccaaaatagagggattaacccgtaatatcggtacccatgcctgtggaaaggttattgga
aggtctcccgtagtcgactatgttccacttatattcgatcaaaagtcgaattctattaac
accgcctttgagagtaaaattatcgaagattgtggacttgtcaaaatggactttttgggt
ctgaaaacattatctatcattgacaataccgtagcgatgattcagaaattacatcctgaa
tttagtatcaacaccatccccgaggatgacgctctcaccttcaaactcttttgtgaaggc
aagacccattctatcttccagtttgaaagtgaaggtatgcaaaaaattctcaaagacgcg
caacctaatagcatagaggatctcatcgctttgaatgcactttatcgaccagggcccatg
caatttattcctgaatttattaaaggaaagaaaagtcctaaccgggtaaaatactttcat
ccttctctcaaagaaattcttaaacccacctatggagttattgtctatcaagagcaagtt
atgcaagtagcacaggtctatgcaggatactctcttggtggtgcggatctactacgtaga
gctatgggtaaaaagaaaaaagaggaaatggataagcaacaacaaatctttattgaagga
gctattgcaaatggtcactccaaggaatctgcagcagaactctttcaaattcttttgcct
tttgctggatatggtttcaataaaagtcatgcagctgcatactctattcttgcctatcaa
accgcttacctcaaagctcattttccggcagaatttatggcagccaatcttagtaatgat
atggatgcaccaaaagcctttatcaagtgtattgacgaaacacgttctatgggtattgct
atacgccctccagaaattaatcacagtcacgagcaatttactgctgaaaatggcgtcatc
tattatggactccttggaatcaaaggtctcggtgagactgcagcttcagatatcattaag
gctagatcaaaagttggacaattcacttcgtttctacactttttagagacaatggcaaaa
gaaaaatatactttaaataaacgtgttattgaaacacttatcttagctgggctttttgac
caaattgaagtagagcgatcgcgtagcttcctacgttataatcatatctcagcaattgac
tgggctattaagctcaataatatggatgatgatccaaatcagtccttatttgactttaaa
gaagaactcagccataccccctttcaatatgcagatatgcctgaatgggaggaggatgaa
catggtaatcgcatatcttatcaactatcgacagaggaaacgctcgctttcgagcatgat
attttaggattttatgtttctggccatccactagaaccatatcgtcaagaatgggatgcc
aaacaatcactcaacctatcagctcttgataatcttaacaagtctacaacttataccgta
attggcatcatgaagcatcttcaagttcgtccaacgaagaaaggttctcttatggcaagt
gcaacgctagaagattttaatggtagcattacaatcgtctttttttcgaaactattgact
gatacaaataactctctactacgaacaagagaaggcaaagctattggcgttcaaggtaaa
ttagaacttgatcgtggatctgatcctcaattaattgtagagaacctctttctcccgaca
gaaaatgatctttctatagttgtagataacgggaagagagatcatcctccccaatcggta
aatatgttcttattggagcaagccattagtgaagtatcacttcatgcacttaaaattgca
ctcagtcgtcaaagagggaatctgcctgtgacattcttcattggtggaagagatggctgt
tccattcctattaaaggaattatgctctcagagacattctttctagatcctgaattaatg
gagttaaaaaaatctcttatagaagattgggagtttattaccgcatgctaa
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