Enterobacter sp. FY-07: AKI40_0117
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Entry
AKI40_0117 CDS
T04405
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
enf
Enterobacter sp. FY-07
Pathway
enf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
enf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AKI40_0117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enf03400
]
AKI40_0117
Enzymes [BR:
enf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AKI40_0117
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AKI40_0117
DNA repair and recombination proteins [BR:
enf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AKI40_0117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AMO46547
LinkDB
All DBs
Position
131295..132104
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLVGETILHAVVRNGRLRWPVSEEIHSLSDKRVLSVQRRAKYVL
LELPDGWIIIHLGMSGSLRILPYELPAEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL
EGHNVLAHLGPEPLSEAFNANYLQQRCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRLASSLSAQECEILVRVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRE
GEPCRVCGTPIVATKHAQRSTFYCRRCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacccgaagtcgaaaccagccgtcgtggcatagaaccgcatttggtaggt
gaaaccattcttcatgcggtggtacgcaacgggcgattacgctggccggtttctgaagag
atccacagcctgagcgataaacgtgtgctcagcgttcagcgccgcgccaaatatgtgctg
ctggagctaccggacggctggatcatcatccatcttggtatgtccggtagcctgcgcatt
cttccctacgaattaccggcagaaaaacacgaccatgtcgatttggtgatgagtaatggc
aaagtactgcgttacaccgatcctcgccgttttggcgcgtggctgtggacgaaagagctt
gagggccacaacgtactggcgcatctcgggccggagccgttaagtgaggcgtttaacgcc
aactatcttcaacagagatgtgcgaagaaaaaaaccgctatcaaaccctggctaatggat
aacaagctggtggtgggtgttggcaacatctacgccagcgaatcgctgtttgccgcaggg
atccaccccgatcgccttgcttcatcactttcggcgcaggagtgtgaaatcctggtgcgc
gtgatcaaagccgttttgctgcgatccattgagcagggtggaaccacgctgaaagacttt
ttgcaaagcgacgggaaaccgggctattttgcgcaagaattgcaggtgtacgggcgggaa
ggtgagccttgtcgcgtatgcggtacgccaatcgttgcgactaagcacgcacagcgttca
acgttttactgtcgtcgttgccagaaataa
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