Enterobacter sp. FY-07: AKI40_1780
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Entry
AKI40_1780 CDS
T04405
Symbol
sbcB
Name
(GenBank) Exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
enf
Enterobacter sp. FY-07
Pathway
enf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
enf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AKI40_1780 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enf03400
]
AKI40_1780 (sbcB)
Enzymes [BR:
enf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
AKI40_1780 (sbcB)
DNA repair and recombination proteins [BR:
enf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AKI40_1780 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AKI40_1780 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AKI40_1780 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AMO48190
LinkDB
All DBs
Position
complement(1826976..1828400)
Genome browser
AA seq
474 aa
AA seq
DB search
MSDSTATPTFLFHDYETFGTSPALDRPAQFAAIRTDADFNIIGEPEVFYCKPADDYLPQP
EAVLITGITPQIARARGDNEAAFAKRIHDLFTVPKTCVLGYNNVRFDDEVTRNIFYRNFY
DPYAWSWQNNNSRWDLLDAMRACYALRPDGIVWPENEDGLPSFRLEHLTKANGIEHSNAH
DAMADVYATIAMAQLVKAKQPKLFDYLFSHRNKQKLAALIDVPQMKPLVHVSGMFGAWRG
NTSWVAPLAWHPENRNAVIMVDLAGDMSPLLTLDADALRERLYTPKADLGDNAAVPVKLV
HLNKCPVLAQANTLRPQDAERLGINRQQCLDNLQHLRDNPQVREKVVAIFAEAEPFTPSE
NVDAQIYNGFFSDADRAAMKILLETEPRNLPALDITFADSRIEKLLFNYRARNFPGTLDE
NEQQRWLQHRRNVFTPEYLQQYADQLQALFQQHDGDSEKQALLKALWQYAEEIV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgattccaccgcaacacccacttttctctttcacgactacgaaacgttcggcacc
agcccggcgctggatcgcccggcgcagttcgccgccatccgcaccgatgcggatttcaac
attatcggcgagccggaggtgttctattgtaaacccgccgacgactatctgccgcagccg
gaagcggtactaataaccggtatcactccgcagatagcccgcgccagaggcgacaatgaa
gccgcttttgccaaacgcattcatgacctgtttaccgtgccgaaaacctgcgtgctcggt
tacaacaatgtgcgctttgacgatgaggtcacgcgcaatatcttctatcgcaacttctac
gatccctatgcatggagctggcagaacaacaactcgcgttgggacttgctggatgcgatg
cgcgcctgttacgcgctgcgcccggacggcattgtctggccggaaaatgaggatggcctg
ccgagctttcgccttgaacacctgaccaaagccaacggcatcgaacacagcaacgcgcat
gatgcgatggccgacgtctatgccaccattgccatggcgcagttggtcaaagcgaaacag
ccgaagttatttgattatctgttcagccaccgcaacaagcagaagctggcggcgctgatt
gatgtgccgcaaatgaagccgctggtgcacgtctctggcatgtttggcgcgtggcgcggc
aataccagttgggttgcgccgctggcctggcacccggaaaaccggaatgcggtgattatg
gtcgacctggcgggcgatatgtcgccgttactgacgctggatgccgatgcgctgcgcgag
cggctctacaccccgaaagccgacctgggcgataacgccgccgtgccggtgaaactggtg
catctgaacaagtgcccggtcctggcacaggccaatacattgcgccctcaggatgcggaa
cggctgggcatcaaccgccagcagtgcctcgataatctacaacacctgcgcgataacccg
caggtgcgggaaaaagtggtggcgattttcgccgaggccgagcctttcacgccctcagag
aatgttgatgcgcagatctacaacggctttttcagcgacgccgatcgcgcggcaatgaaa
attctgctggaaaccgagccgcgcaatttgcccgctctggatatcacctttgccgacagc
cgtattgagaagttgctgtttaactaccgtgcacgtaatttccctggtacgctggatgaa
aacgagcagcagcgctggcttcagcaccgtcgcaatgtctttacccctgagtaccttcaa
cagtacgccgaccagctacaagcactgttccagcagcacgatggcgacagcgaaaaacag
gcgctgctgaaagcgctatggcagtatgccgaagagatcgtgtga
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integrated database retrieval system
