Enterobacter sp. FY-07: AKI40_2246
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Entry
AKI40_2246 CDS
T04405
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
enf
Enterobacter sp. FY-07
Pathway
enf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AKI40_2246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enf03019
]
AKI40_2246
Enzymes [BR:
enf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AKI40_2246
Messenger RNA biogenesis [BR:
enf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AKI40_2246
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
PCF11_RFEG_rpt
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AMO48647
LinkDB
All DBs
Position
2262808..2264451
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AA seq
547 aa
AA seq
DB search
MLVQPGLNESPAALSLWDILCVRSQKLIHSAPSWHCGFCHQSNYYLLENYTCDRSGRCGV
VMSFDALGLNPDILRAVAEQGYLQPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPL
LQRLIQSEPHAKGRRPVRALILTPTRELAAQVGENVREYSKYLNIRSMVVFGGVSINPQM
MKLRGGVDVLVATPGRLLDLEHQNALKLDSVEILVLDEADRMLDMGFIHDIRRVLAKLPA
KRQNLLFSATFSDEIKQLAEKLLRNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQM
IGEGNWQQVLVFTRTKHGANHLAEQLNKDGITSAAIHGNKSQGARTRALADFKSGDIRVL
VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD
IERLLKKEIPRIALAGYDPDPSIKAEPIQNGRGQGGGRQGGGRGQGGRGQSAPRRTDGEA
QKPRTPRRSEGGAAKPEGGRRSEGGAGGRRPDGGATKPAGGRRLDGGAAKPAGNASRRRP
RKPSAAQ
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgtccagcctgggctgaacgaatctcccgctgcgctttctttgtgggatatttta
tgcgtgcgatcacaaaagctgatacactccgccccttcatggcattgtggtttttgtcat
caatcaaattattatctcctcgaaaactacacctgtgacaggtcggggcggtgcggagtt
gttatgtcatttgatgcccttggcctgaatccggatattctgcgcgcggtcgcagagcag
ggttaccttcagccaacccctattcagcagcaggcgatcccggctgtgttgcaaggccgc
gacctgatggccagtgcccagacgggtaccggtaaaaccgccggttttaccctgccgttg
ttgcagcgtttgatccagagcgagccgcacgcgaaaggccgtcgtccggtgcgtgcgctg
atcctgacgccgacccgtgaactggcggcacaggtgggtgaaaacgttcgtgagtacagc
aaatacctgaatatccgctctatggtggtgtttggcggggtcagcattaacccgcagatg
atgaagttgcgcggcggcgtagatgtgctggtagcgacacccgggcgtctgttggatctg
gaacaccagaatgcactgaaactcgatagtgtggaaattctggtgctggacgaagccgat
cgcatgctggatatgggctttatccacgatattcgccgcgtactggcgaagctgccggct
aaacgccagaatctgctcttttccgcgaccttctcggatgagattaaacagttggcggaa
aaactgctgcgcaacccgctcgaaattgaagtggcgcgccgcaacaccgcgtctgaacag
gtgacgcagcatgttcatttcgttgataaaaaacgcaagcgtgaactgctgtcacagatg
atcggcgagggtaactggcagcaggtgttggtcttcacccgcaccaagcatggcgccaac
catctggctgaacaactgaacaaagacggcattaccagcgccgctatccatggcaataaa
agtcagggcgcgcgtacccgtgcgctggcggatttcaaatccggcgatattcgcgtgctg
gtggcgaccgatattgccgcccgtggtctggatattgaagagctgccgcacgtggtgaac
tatgagctgcccaacgtgccggaagattacgtgcaccgtattggccgtaccggccgtgcg
gctgcaaccggtgaagcgttgtcgctggtgtgcgttgatgagcataaactgctgcgcgat
attgagcgtctgctgaagaaagagatcccacgcattgcattagcgggctacgatccggat
ccgtcaatcaaagccgaacccattcaaaatggtcgcggccagggcggtggtcgtcagggt
ggtggtcgcgggcagggcggtcgtggtcagtcagcaccgcgtcgcaccgatggcgaagcg
caaaaaccgcgcacaccgcgccgtagtgaaggcggggccgctaagccggaaggtgggcgc
cgtagcgaaggtggggcaggtggacgtcgtcctgatggtggtgcgaccaagccagcaggt
ggacgtcgccttgacggcggagccgctaaaccagcaggtaatgcatcccgtcgtcgtccg
cgcaaaccgtctgccgcgcagtaa
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