Enterobacter sp. FY-07: AKI40_3265
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Entry
AKI40_3265 CDS
T04405
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
enf
Enterobacter sp. FY-07
Brite
KEGG Orthology (KO) [BR:
enf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enf03019
]
AKI40_3265
Enzymes [BR:
enf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AKI40_3265
Messenger RNA biogenesis [BR:
enf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AKI40_3265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
HA2_N
nSTAND3
T2SSE
NACHT
ResIII
PhoH
AAA_16
NTPase_1
AAA_23
TsaE
Motif
Other DBs
NCBI-ProteinID:
AMO49645
LinkDB
All DBs
Position
complement(3302222..3306157)
Genome browser
AA seq
1311 aa
AA seq
DB search
MFTGSALPNNAMTEQNKVTITDLHHQLDTLMLRDRQRFARRLQGSKKVKNPESQQALFRQ
IAGEMAEAAGKVLLREAARPVIDYPDNLPVSQKKQTILEAVRDNQVVIVAGETGSGKTTQ
LPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTL
VKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLRELLPRRPDLKVIITS
ATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEDADDTERDQLQAIFDAVDELGRES
AGDILIFMSGEREIRDTADALSKRDLRHTEILPLYARLSNSEQNRVFQPHSGRRIVLATN
VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICI
RLYSEDDFLSRPAFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLL
EELGAITTDEQQLAYKLTPMGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD
PRERPLDKKQASDEKHQRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRQCRVDYLNYL
RVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEFTGARN
ARFSIFPGSGLFKKPPKWTMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRAYSEPHW
ERAQGAVMATEKVTVYGLPIVAARKINYSQIDAALCRELFIRHALVEGDWQTRHAFFRDN
LKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHEVISARHFDSWWKKASRETPDLLN
FEKSMLIKEGAESVSKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEES
GFEWQIPGLRRELVIALIKSLPKPTRRNFVPAPNYAEAFLGRVTPLELPLLDALERELRR
MTGVTVDRDDWHWDQVPEHLKITFRVVDDKNKKLLEGRSLAELKESLKGKVQETLSAVAD
DGIEQSGLHIWSFGTLAESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPQEQQQAMWRG
IRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIDDAGGPVW
TEENFAALHEKVRAELNDTVVEIAKQVEQILTTVFNINKRLKGRVDMTMALGLSDIKAQM
SGLVYRGFVTGNGFRRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVEQTQQAWQQWLN
KLPPARREEEDVKAIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccggcagtgctctgcccaataacgccatgacagaacaaaataaagtaacgatt
accgatctccaccatcaactcgatacgctgatgctgcgtgacaggcagcgcttcgcccgt
cggctccagggcagtaagaaagttaaaaatcctgaatctcagcaagcgctgttccgccag
atagccggggagatggccgaggcggcagggaaagtcctgctgcgcgaagcagcgcgcccg
gtcattgattatccggacaatttaccggtcagccagaagaagcagaccatccttgaagcg
gtacgtgacaaccaggtggtgattgtcgccggggaaaccggttccggtaagaccacgcag
ttgccgaaaatttgtatggagctggggcgcggaattaaggggctgattggccatacgcag
ccgcgccgtctggcggcgcgcaccgtagcaaaccgtattgccgaagagctgaaaaccgag
ccgggcggttgcatcggttataaagtgcgctttagcgatcacgtcagcgataacaccctg
gtcaagctgatgacggacgggattttgctggcagaaatccagcaggatcgcctgctgatg
cagtacgacaccatcattattgatgaagcgcacgaacgcagcctgaatatcgacttcctg
ctgggttacctgcgtgaactgttgccacgccgtcccgacctgaaagtgatcatcacgtcg
gcgaccatcgatccggagcgcttttcacgccatttcaataatgcgcccatcattgaagtg
tccggtcgcacttatccggtcgaagtccgttaccgcccgattgtcgaagacgcggacgac
acggaacgcgatcagttacaggcgattttcgacgctgtagatgaattggggcgcgaaagc
gcgggcgacattctgattttcatgagcggtgagcgtgaaatccgcgataccgccgatgca
ctcagtaagcgtgatttgcgccatacggaaatcctgccgctctatgcgcggttgtccaac
agcgaacagaaccgggtattccagccgcacagtggtcgacgcattgtgctggcaaccaac
gtggcggaaacatcgctcaccgtaccgggcattaaatatgtgatcgatcccggaacggcg
cgtatcagtcgttacagctaccgaacgaaagtgcagcgtctgcccatcgagccggtgtca
caggcctctgccaatcagcgtaaaggtcgttgcggccgtgtatcggaagggatctgtatt
cgtctctattccgaagatgatttcctgtcgcgcccggcatttaccgacccggaaattttg
cgcactaaccttgcttcggtcattttgcagatgaccgcgctggggctgggcgacattgcc
gccttcccgttcgtggaagcgccggacaaacgcaatatccaggatggggttcgtctgctg
gaagagctgggtgccatcaccactgatgagcagcagctggcctataaactgacgccgatg
gggcgccagttgtcgcagttgccggtggatccgcgtctggcgcgtatggtgctggaggcg
caaaaacacggttgcgtgcgtgaagcaatgatcattacctctgcgctgtcgattcaggat
ccgcgagagcgtccgctggataaaaagcaggcgtcagatgagaaacaccagcgcttccac
gataaagagtccgatttcctcgcatttgtgaatttgtggaactacctcggcgagcagcaa
aaagcgctctcttcgaatcagttccgccgccagtgccgggttgattatcttaactacctg
cgcgtgcgcgaatggcaggatatctacacccaactacgtcaggtggtgaaagagctggga
ataccggtgaacagcgaaccggcggagtaccgtgaaatccatatcgccttgttgactggt
ttgttgtcgcacattggtatgaaagatgccgacaagcaggagttcaccggtgcgcgtaac
gcgcgtttttctatcttcccgggctccggattattcaaaaagccgccaaaatggacgatg
gtcgcagagctggtggaaaccagtcgtctgtgggggcgcattgccgcgcgtatcgatccg
gagtgggttgaaccggtggcgcagcatcttatcaagcgtgcctacagtgaaccgcactgg
gagcgggcgcagggcgccgtgatggccacggagaaagtgactgtctacggtttgcccatt
gttgctgcgcgcaagatcaactacagccagatcgatgcggcgctgtgccgcgagttgttt
atccgccacgcgctggttgaaggcgactggcaaacccgccatgcgttcttccgcgacaat
ctgaaactgcgtgcggaagtggaggagctggagcacaaatcccgccgccgtgacattctg
gtggacgacgaaacgctgtttgagttttacgatcagcgcatcagccatgaggtgatttcc
gcccgtcattttgacagttggtggaaaaaagccagccgtgagacgccggacctgctcaac
tttgagaagagcatgctgatcaaagaaggcgcggagagcgtcagcaagctggattacccc
aacttctggcatcagggtaacctgaaactgcgcctcagctaccagtttgaaccgggtgcg
gacgccgacggcgtgacggtgcatattcccttgccgctgcttaaccaggtggaagagagc
gggtttgaatggcagatccccggcttgcgtcgtgaactggtcattgcgctgatcaaatca
ttaccgaagccgacgcggcgaaattttgtgccggcacccaactacgccgaggcgtttctc
ggacgggttacgccgctggaactgccgttgctggatgccctggaacgtgaactacgccgc
atgaccggcgttaccgttgatcgcgacgactggcattgggatcaggtgcctgagcacctg
aaaatcacattccgtgtggtggatgacaaaaacaaaaagctgcttgaagggcgttcgctg
gctgaactgaaagagagcctgaaaggcaaagtgcaggagacgctctccgccgttgccgat
gacggtatcgaacagagcgggctgcatatctggagctttggcacgctggcggaaagctac
gagcagaagcgcggcaactataaggtcaaagcctggcccgcgctggtggatgaacgcgac
agtgtggccatcaagttgtttgataacccgcaggagcagcaacaggcgatgtggcgcggt
atccgccgtttgctgctgctgaacattccttcacccattaagtatctgcacgaaaaactg
cccaataaagccaaactggggctctactttaacccgtacggcaaagtactggatctgatt
gatgactgtatttcctgcggcgtagataagttgattgatgatgcgggcggcccggtgtgg
acggaggagaacttcgcagcgctgcacgagaaagttcgcgcagagctgaatgacaccgtg
gtggagatcgctaaacaggtcgagcagatcctgacgacggtttttaacatcaataagcgg
ctgaaagggcgcgtggacatgacgatggcgctggggctgtctgacatcaaagcgcagatg
agcgggctggtgtaccgcggatttgtcaccgggaatggtttccgccgcctgggtgatacg
ctgcgttatttgcaggctattgagaaacgcctggagaaactggcggttgatccgcaccgc
gatcgtgcgcagatgttgaaagtcgagcagacgcagcaggcatggcagcagtggctgaat
aagctcccaccagcacgacgtgaagaggaagacgtcaaagcgatccgttggatgatcgaa
gagttgcgcgtcagctattttgcgcagcaacttggtacgccgtatcccatctccgataag
cgtattttgcaggcgatggagcaaatcagcggatag
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