Enterobacter sp. FY-07: AKI40_3303
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Entry
AKI40_3303 CDS
T04405
Symbol
rnb
Name
(GenBank) Exoribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
enf
Enterobacter sp. FY-07
Brite
KEGG Orthology (KO) [BR:
enf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
enf03016
]
AKI40_3303 (rnb)
Enzymes [BR:
enf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AKI40_3303 (rnb)
Transfer RNA biogenesis [BR:
enf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AKI40_3303 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
AMO49683
LinkDB
All DBs
Position
3345490..3347424
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AA seq
644 aa
AA seq
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MLQDNPLLAQLKQQLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
IAVIHSEKERESAEPEELVEPFLTRFVGKVQKKDDRLSIVPDHPLLKDAIPCRAARGVEH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFAEDHFVPWWVTLARHNLEKEAPNGVAT
EMLDDGLERVDLTALDFVTIDSASTEDMDDALYVEETRDGKLQLTVAIADPTAWIAEGSK
LDDAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPALVCRMTLDSEGAIDSNIEF
FAATIESKAKLAYDDVSDWLENSGEWQPPSDAIAAQIRLLHRVSQLRAEWRHAHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRVANRIVEESMIAANICAAQVLRDKLGFGIYNVHMGFD
PANSEQLAAMLKTHGMHVDAEEVLTLDGFCKLRRELDAQPSGFLDSRIRRFQSFAEISIE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGETPKRPQDDTTVQMAERRRLNRM
AERDVGDWLYARFLQDKAGTDTRFSAEIIDVSRGGMRVRLVDNGAVAFIPAPFIHAVRDE
LVCSQESGTVQIKGETVFKVTDVIDVTIAEVRMETRSVIARPAM
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgctccaggacaatccgctgcttgcgcagctaaaacagcaacttcattcacagacaccg
cgtgcggaaggcgtcgtcaaaggcacagaaaaaggctttggctttctggaagtcgatgcg
caaaaaagttatttcattccgccgccgcaaatgaagaaagtgatgcatggcgatcggatc
attgccgtcatccacagtgaaaaagagcgcgaaagtgcagagccagaagaactggttgaa
ccgttccttacccgttttgtcggcaaagtgcagaagaaagacgaccggctttctatcgtg
cctgaccatccgttgctgaaagacgcgattccttgccgcgcggcccgtggcgttgagcac
gattttaaagaaggcgactgggctgtcgcagagatgcgtcgccatccgttgaagggcgat
cgcggtttttacgctgagctgacgcagtttattaccttcgcagaagatcattttgtaccg
tggtgggtgacactcgcacgccacaatctggaaaaagaagcgccaaacggcgtggctacc
gaaatgctggatgacggtctggagcgcgtggatcttaccgcgctggatttcgtcactatc
gacagcgccagcaccgaagatatggatgatgcgctgtacgttgaagaaacgcgcgacggg
aaactgcaactgacggttgccatcgccgacccgacagcctggattgctgaaggcagcaaa
ctggatgatgcggctaaaattcgtgccttcaccaactacctgccgggctttaatatcccg
atgctgccgcgcgaactgtccgacgatctctgctccctgcgcgcgaatgaagttcgcccg
gcactggtgtgccgtatgacactggatagcgaaggcgccatcgacagcaatattgagttt
tttgccgcaaccatcgaatcaaaggccaaactggcctacgatgatgtctccgactggctg
gaaaacagcggagaatggcagccgccaagcgacgccattgctgcgcaaatccgcttgttg
caccgcgtaagccagctccgagctgagtggcgccatgcgcacgcgctggtgtttaaagat
cgcccggattaccgttttgtccttggcgaaaaaggcgaagtgctggatatcgtggcagaa
ccgcgccgcgtagctaaccgtattgttgaagagtcaatgatcgccgccaacatctgtgcc
gcacaggtattacgcgacaagctgggcttcggtatttacaacgtgcatatgggctttgac
ccggctaacagtgaacaactggccgccatgctgaaaacgcacggcatgcacgttgatgcg
gaagaggtgctgacgctggacggcttctgtaaactgcgtcgcgaactggatgcacagccg
tcgggcttccttgatagtcgtattcgtcgcttccagtcttttgctgagatcagcatcgaa
ccaggcccgcacttcggtctgggactggaagcctacgcgacctggacctcaccgattcgt
aagtatggcgacatggtcaaccatcgtctgctgaaagccattattaaaggtgaaacgcca
aaacgtccgcaggatgacacaaccgtgcagatggctgaacgccgccgtcttaaccgcatg
gcggagcgtgatgtcggtgactggctgtatgctcgcttcctgcaggacaaagccggtact
gatacccggttctctgcggaaattatcgatgtcagccgcggcggcatgcgtgttcgtctg
gtggataatggcgcagtcgcgtttattcctgcaccgtttattcatgccgtacgtgatgaa
ctggtatgcagtcaggaaagcggcaccgtgcaaattaaaggcgaaaccgtattcaaagtg
accgatgttattgatgtcaccattgcggaagtccggatggaaacccgcagcgtgatcgcc
cgccctgccatgtaa
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