Enterobacter sp. FY-07: AKI40_3946
Help
Entry
AKI40_3946 CDS
T04405
Name
(GenBank) Nuclease sbcCD, subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
enf
Enterobacter sp. FY-07
Brite
KEGG Orthology (KO) [BR:
enf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enf03400
]
AKI40_3946
DNA repair and recombination proteins [BR:
enf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AKI40_3946
Archaeal homologous recombinant proteins
AKI40_3946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_15
nSTAND3
ABC_tran
cobW
MobB
AAA_21
ABC_ATPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMO50323
LinkDB
All DBs
Position
4015216..4018362
Genome browser
AA seq
1048 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR
LSTLSQSQNDLMTRDTADCLAEVEFEVKGVAYRAFWSQSRARGLPDGNLQAPRVELATCA
DGKILADKVKDKLDLTASLTGLDYGRFTRSMLLSQGQFAAFLNAKPRERAELLEELTGTE
IYGQISARVFEKHKAAKTRLETLQAQAEGVVILNDEQRHQLEQGLQALTSQEQQIMAELG
SAQAQANWLNRDGELRAARGRAQAALVQAQQAQTRAQPQLAALERAQPAQQLRPLWDRLE
EQRNALLRTRNQSEEVNTRLQARLLQRARIRASALQQLTTLQATHKTLEIWLNEHARFQR
WQSELTGWRALFNQLDDEKKQWLSLQQRIQSHETKLRTLPIATLELSVEETAAAMHQCAQ
NRPLRQQLTALHARFAPLRKQLSLRQQSLLDLKAEQETLSAGLARKREVYKEKNQLLSEV
TTICELENRIKDLESERARLQPGHPCPLCGATEHPAIAHYQTLEPGVNQARRNALDLEVR
QVKEEGVALGERLKGLAERYEKDEREIATLQQDEKALLEAWAKACAELNVILEPHRELTS
WQSAQDAYEHQLYLLNQRQTLQLQIHELHQQSEHYQQAVVRRRTSLAEALQPLALSLPPE
GEEEAWLAARAQEADQWQQQQQQLVALHERMALLTPIIDTLPADEIAVDEQTFPLEGWRQ
VHNDCISLHSQWQTLQHQLAQQSENEKTLENQFSDALKNSVFADQQAFLAALLDEGERQR
LEQLRQQLERDCQQKQALAASAEQAVAAHQAQRPAGMDLNSTTESASSVLEQLGRQLREN
TTRQGEFRQQLKQDSDNRQRQINVLQEIEQATARCDDWGHLNALIGSKEGDKFRKFAQGL
TLDNLVWLANNQLTRLHGRYLLKRKASEALELEVVDTWQADAVRDTRTLSGGESFLVSLA
LALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKE
RIPVQIKVKKINGLGYSKLDGKYAVLSR
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagtttgcggctgaaaaaccttaactcgctgaaaggcgaatggaaaatc
gacttcaccgcagagccctttgccagcaacggtctgtttgccattaccggcgcgaccggg
gcgggcaaaaccacgctgctggatgccatctgcctggcgctgtaccacgaaacgccgcgt
ctcagtacgttgtcacaatcgcaaaacgatttaatgacccgcgacaccgccgactgtctg
gcagaggtggagtttgaggtaaaaggcgtggcctaccgcgcattctggagccagagtcgc
gcccgcggtttgccggacggcaatctgcaagcacctcgtgtggagctggccacctgcgcc
gacgggaaaattctcgccgacaaagtcaaagataaactcgatctcactgcctcgctgacc
gggctggattacgggcgctttacccgttcgatgctgctctcacaggggcaattcgctgcc
tttctcaatgcgaaacctcgcgagcgagcagaattgctggaagaactgaccggcaccgaa
atttatgggcagatttccgcccgggtgtttgagaaacacaaagcggcaaaaacccggctg
gaaacattacaggcacaggccgaaggggtagtgatactgaatgatgagcaacgccaccag
ctcgagcaaggtttgcaggcgctcacttcgcaagaacagcagatcatggcagagctaggt
agcgcccaggcgcaggcaaactggctgaaccgcgatggcgaactgcgcgccgccagaggc
cgggcgcaggcagcgttggtacaggcgcaacaggcgcagacccgtgcacagccgcaactg
gccgcgctggaacgcgcacaaccagcacaacagcttcgccccctctgggacagactggaa
gaacaacgcaacgcacttcttcgcactcgcaaccagagcgaagaagtaaacactcgctta
caggcccgtttgcttcaacgtgcacgcatccgcgccagcgcgctgcaacagctcaccacc
ctgcaagccacgcacaaaacgctggagatctggctgaacgaacatgcgcgtttccagcgt
tggcaaagcgagctgaccggatggcgggcgctgtttaatcaattggacgatgagaaaaag
cagtggctgagtctgcaacagcgcatccagagtcatgaaaccaaactgcgtactctgccg
atcgccacgctggaactcagtgtggaagagacagccgctgccatgcaccagtgcgcgcaa
aaccgcccgctgcgccagcaactgaccgccctgcacgcccgttttgcgccgctgcgcaag
caattaagtctgcgccagcaaagcttgctcgacctgaaggctgaacaggagacgctcagc
gccggactggcgcgcaagcgcgaggtgtataaagaaaaaaaccagcttttgagtgaggtc
actaccatttgcgagctggaaaaccgcatcaaagacctggagagcgagcgcgcccgtctg
caaccgggtcatccctgcccgctgtgcggcgcaacagagcacccggcaattgcgcactat
cagacgctcgaaccgggtgttaaccaggcccggcgtaacgcgctggatctggaagtccgc
caggtcaaagaggaaggcgttgcgctcggcgagcggctgaaagggctcgccgagcgctat
gaaaaagatgagcgcgaaattgcaacgctgcaacaagatgagaaagcgttgctagaggca
tgggcgaaagcctgtgcagagctgaacgtgatactggaaccgcatcgcgagctgaccagt
tggcaaagcgcgcaggacgcgtatgagcatcagttgtatttgctcaatcagcgccagaca
ctgcaacttcagatccacgaattacatcagcaaagcgaacattatcagcaggcggtggtt
cgtcgtcgcaccagtctcgccgaggccttgcagccgctggcgctgagtctgccgccggaa
ggcgaagaggaagcgtggctggccgcacgtgcgcaggaagcggatcagtggcaacagcaa
caacaacagcttgtcgccctgcatgagcgcatggcgttgctaacgcccattatcgacacg
ctccccgccgatgagatagccgttgatgaacagaccttcccgcttgagggctggcgccag
gtgcataatgattgcatttcgctgcacagccaatggcaaacgctgcaacaccagcttgcc
cagcagagcgaaaatgaaaagacgctggaaaaccagttttccgacgcgttgaaaaacagt
gtgtttgccgatcaacaggcgtttctcgccgccttgctggatgagggcgaacgtcagcgg
ctggagcagttacggcagcaacttgaacgcgattgccaacagaagcaggcgcttgccgcc
agcgctgagcaggctgtcgcggcgcaccaggcgcaacgtcccgccggaatggacctcaat
agcacaacggagagtgccagctcggtgctggaacaactcggtcgccagctacgggaaaat
accactcgccagggcgagtttcgccagcaactgaagcaggatagcgataaccgccagcgc
cagataaacgtattgcaggagatagaacaggccaccgcgcgctgtgacgattgggggcat
ctgaatgcgttgatcggctccaaagagggagataagttccgcaaattcgcgcagggctta
acgctggataatctggtgtggctggcgaacaatcagctgactcgcctgcatggccgctat
ttgttgaaacgcaaagccagcgaagcgctggaactggaagtggtagacacctggcaggcg
gacgccgtgcgtgatacgcgcacgctctccggcggcgaaagtttcctggtcagcctggcg
ctggcactggcactgtccgacctggtgagtcacaaaacccgcatcgattcgctgttcctg
gatgaggggttcggcaccctggacagcgaaacactggataccgctctcgatgccctggac
gccctcaatgccagcggcaagaccattggcgttatcagccacgtcgaagcaatgaaagag
cgtattccggtgcagatcaaagtgaagaagatcaacggcctgggttacagcaaactcgac
ggcaaatacgcggtgttgtcgcgctga
DBGET
integrated database retrieval system
