Enterobacter sp. FY-07: AKI40_4105
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Entry
AKI40_4105 CDS
T04405
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
enf
Enterobacter sp. FY-07
Pathway
enf03030
DNA replication
enf03430
Mismatch repair
enf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
enf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AKI40_4105
03430 Mismatch repair
AKI40_4105
03440 Homologous recombination
AKI40_4105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
enf03032
]
AKI40_4105
03400 DNA repair and recombination proteins [BR:
enf03400
]
AKI40_4105
Enzymes [BR:
enf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AKI40_4105
DNA replication proteins [BR:
enf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AKI40_4105
DNA repair and recombination proteins [BR:
enf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AKI40_4105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AMO50482
LinkDB
All DBs
Position
complement(4184366..4187848)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGTGHGA
GIKPIVGADFHVQCDLLGDELTQLTVLAANNVGYQNLTLLISRAYQRGYGAQGPWIDRDW
LLELNEGLILLSGGRMGDVGKCMLRGNSALVDQCLAFYIEHFPDRYYLELIRTGRADEET
WLHAAVQLAEEHGLPVVATNDVRFLEAGDFDAHEIRVAIHDGFTLDDPKRPRNYSAQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGEMTTEDFLVTKSKEGL
EERLKFLFPDEEERLKRRPEYDQRLDTELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKQGQPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGAKKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNSGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQVEQSYASCQPWPEQVQLDGERETLGLY
LTGHPINQYLKEIERYVGGYRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRTDARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcacagcgactattccatgatcgatggg
ctggcgaaaaccgggccgctggtgaaaaaggcggcctcgttgggcatgcctgcgctggcg
atcaccgattttaccaacctgtgtggtctggtgaagttctacggaacggggcacggggcg
ggtataaagcccatcgttggcgctgactttcatgtgcaatgcgaccttcttggcgacgag
ctgacgcaactgaccgtccttgctgccaacaatgttggctatcagaatctgacactgctg
atatcacgcgcctaccagcggggctacggtgcgcaagggccgtggatcgatcgtgactgg
ttgctggaactcaacgaaggactgatcctgctttccggcggtcgtatgggggacgtcggg
aaatgtatgcttcgcggcaacagcgcgctggttgatcagtgcctggctttttatattgag
catttccccgatcgttattacctggaattgatccgcaccgggcgcgctgacgaggaaacc
tggctgcatgctgcggtgcaactggcggaagaacacggtttacctgttgtcgccaccaac
gatgtgcgttttcttgaggcaggcgatttcgacgcgcatgaaatccgtgttgccatccat
gacggctttaccctcgacgaccccaaacgcccgcgcaactactctgcccagcaatatatg
cgcagtgaagaggagatgtgcgagctgttttccgacattccggaagcgctggagaactcg
gtagaaatcgccaaacgttgtaatgtcaccgtgcgtttgggcgagtattttctgccgcaa
tttccgaccggtgaaatgaccaccgaagacttcctggttactaagtcaaaagaggggctg
gaagagcgtctgaaattcctcttcccggatgaagaagagcgccttaaacgtcgcccggaa
tatgatcaacgtctggatactgaactccaggtgatcaaccagatggggttccccggctac
ttcctgatcgtgatggagtttatccagtggtcgaaagataacggcgtaccggtagggcca
ggacgtggttctggtgcgggttcgttagtggcctatgcgctgaaaattaccgatctcgat
ccgctggaatttgacctgctgttcgaacgtttcctgaacccggaacgtgtctcaatgccc
gatttcgacgttgacttctgtatggagaagcgcgaccaggtaattgagcacgtcgcggac
atgtacgggcgcgacgcggtatcgcagattatcacctttggtaccatggcggcgaaagcg
gttatccgtgacgtggggcgcgttctcggtcacccgtacggctttgtcgatcgtatttcc
aaactggtgccgccagatccgggcatgacactggcgaaagccttcgaagcggaaccgcaa
ctgccggaaatttacgaagcagacgaagaagttaaggcgctgattgatatggcgcgcaaa
ctggaaggggtgacgcgaaacgccggtaaacacgccggtggtgtggtgatcgcaccgacc
aaaatcaccgattttgcaccgctgtactgcgacgaagccggtcagcacccggttacccag
tttgataaaaacgatgtggaatacgcggggttggtgaagtttgacttcctcggactgcgc
acgctgaccatcatcaactgggcgctggagatgatcaacgcccgccgcgaaaaacagggg
cagccgccactggatatcgccgccatcccgctggatgacaagaaaagtttcgacatgttg
caacgctcggaaaccacagcggtattccagcttgaatcccgcggcatgaaagatttaatt
aagcgactgcagccggactgcttcgaagatatgatcgcactggtggcgctgttccgtccg
gggccgttgcagtcgggcatggtggataactttatcgaccgcaaacacgggcgcgaggag
atctcttatccggatgtgcagtggcagcatgaaagcctgaaaccggtactggagccaacc
tacggcattatcctgtatcaggaacaggtcatgcagattgcccaggtcttgtcgggttat
acccttggtggcgcagatatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gcaaagcagcgcggtacgttcgaagaaggggcgaagaaaaacggcgttgacggcgaactg
gcgatgaaaatctttgacctggtggagaaattcgccggttacggatttaacaaatcgcac
tctgccgcctatgctttggtgtcatatcagacgctgtggctaaaagcccactacccggct
gagtttatggcggcggtaatgacggcggacatggataacaccgagaaagtagtcggtctg
gtggatgaatgctggcgcatggggctgaaaatcctgccgccggatatcaactcaggtctt
taccatttccacgtcaatgatgacggggaaattgtctacggcatcggtgccattaaaggt
gtgggtgaaggcccaatcgaagcgatcattgaagcgcgtaatagcggtggttacttccgc
gagttgtttgatctgtgcgcacgtacggacattaaaaagctgaaccgccgcgtgcttgaa
aaattgattatgtccggggcgtttgatcgccttggcccgcatcgcgcagcgctgatgaac
tcgctgggtgatgcgttgaaagcggccgatcagcacgccaaagcggaagcgatcggccag
gcggatatgttcggtgtgctggcggaagagccggagcaagttgagcagtcctacgccagt
tgccagccatggccagaacaagtccaactggatggcgaacgggaaacgttaggtttgtac
ctgaccgggcacccgatcaaccagtatttgaaagaaattgagcgctatgtcggaggctat
cggctgaaagacatgcatccgaccgaacgtggaaaagtgaccacggcggcggggctcgtc
attgctgcgcgggttatggtcaccaagcgcggcaatcgtatcggcatctgtacgttggat
gaccgttccgggcgtctggaggtgatgttgttcaccgacgcactggataaataccagcaa
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggcgggcttaaaatgaccgcccgcgaagtgatggacattgacgaagcccgggaaaaatat
gcccgtgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccgcaccgttcgggaaccattccagtacatctctactatcag
aggacggatgcgcgtgcgcgtttacgcttcggcgcaacgtggcgcgtctctccgagcgat
cgtttacttaacgatttgcgtggcctcataggttcggagcaggtggaactggagtttgac
taa
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