Enterobacter sp. FY-07: AKI40_4685
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Entry
AKI40_4685 CDS
T04405
Name
(GenBank) PLP-dependent transferase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
enf
Enterobacter sp. FY-07
Brite
KEGG Orthology (KO) [BR:
enf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
enf03016
]
AKI40_4685
Enzymes [BR:
enf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
AKI40_4685
Transfer RNA biogenesis [BR:
enf03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
AKI40_4685
Prokaryotic type
tRNA splicing ligases
AKI40_4685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
AMO51060
LinkDB
All DBs
Position
complement(4797200..4798429)
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AA seq
409 aa
AA seq
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MMQNNDYQLLAQENTAPVKMWTHGVPVEPEAREQLLKTAKMPFIFKHLAVMPDVHLGKGS
TIGSVIPTKGAIIPAAVGVDIGCGMIAVRTSLLAGDLPDNLSGLRSAIEQAVPHGRSVNR
AKRDKGAWENPPQEVNNHWALLAPRFQRLTEKYPQLLKTNNHQHLGTLGTGNHFIEICLD
EQQRVWVMLHSGSRGVGNAIGNVFITLAQQDMQQHIANLPDRNLAYFQEGSKHYDDYLEA
VEWAQDFARHNREVMMARVLAVLSKTVTKPFMTQQEAVNCHHNYVQKETHFGEAVWVTRK
GAVSAQKGQMGIIPGSMGAKSFIVRGLGNEDSFCSCSHGAGRTMSRTAAKKRFTVDDQIR
ATAHVECRKDSDVIDEIPMAYKDIDAVMAAQASLVEVVHTLRQVVCVKG
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaataacgattatcagttgctggcgcaggagaacaccgcgccggtgaaaatg
tggacccacggcgtaccggtagaaccggaagcgcgtgagcaactgctgaagacggcaaaa
atgccatttatcttcaaacatctggcggtgatgccagatgtacatctgggaaaaggctcg
accatcggcagtgtgatcccgaccaaaggggcgattatcccggcggcggttggcgtggat
attggctgcggcatgattgcggtacgcacctcgctgttggcgggggatctaccggacaac
ctgagcggattgcggagcgccatcgagcaggccgtaccgcatggccgttcggtgaaccgt
gcgaagcgtgataaaggcgcctgggaaaatccgccccaggaagtgaataaccactgggct
ttgctggcaccgcgttttcagcgtttaacggagaaatacccccaattgttgaaaaccaat
aatcatcagcatctgggtacattgggaaccggtaaccactttattgaaatatgtctggat
gaacagcagcgtgtatgggtgatgttgcacagcgggtcgcgtggtgtcgggaacgccatt
ggtaatgtgtttattactctggcgcagcaagatatgcagcagcatattgcgaacctgccg
gacagaaacctggcttactttcaggaaggtagcaaacactatgatgactatctggaagcg
gtggagtgggcgcaggattttgcccgccataaccgtgaagtgatgatggcgcgggtactg
gctgtactgtcgaagaccgtcaccaaaccctttatgacgcagcaggaagccgtaaattgt
catcacaactatgtgcaaaaagagacgcactttggtgaagcggtatgggtcacgcgtaaa
ggtgcggtttcggcgcaaaaagggcagatggggatcattcctggttcgatgggggcgaaa
agctttattgtccgcgggctgggtaatgaagatagtttctgttcctgtagccacggcgcc
ggacggaccatgagccgtacggcggcgaaaaaacgttttacggtggatgatcagatccgc
gccactgcgcatgtggagtgccgtaaagacagcgatgtgatcgatgagatcccgatggct
tacaaagatattgatgccgtgatggcggcgcaggcctcgctggtggaagtggtgcatacc
ttgcgtcaggtggtgtgtgtaaaaggataa
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