Enterobacter sp. FY-07: AKI40_4806
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Entry
AKI40_4806 CDS
T04405
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
enf
Enterobacter sp. FY-07
Pathway
enf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AKI40_4806 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enf03021
]
AKI40_4806 (rho)
03019 Messenger RNA biogenesis [BR:
enf03019
]
AKI40_4806 (rho)
Transcription machinery [BR:
enf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AKI40_4806 (rho)
Messenger RNA biogenesis [BR:
enf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AKI40_4806 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AMO51179
LinkDB
All DBs
Position
complement(4931566..4932897)
Genome browser
AA seq
443 aa
AA seq
DB search
MDDPAIPFTTLSSRFTPSLRTHTIMNLTELKNTPVSELITLGENMGLENLARMRKQDIIF
AILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDT
ISGKIRPPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTED
LTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEV
TEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNT
VVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFK
GTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAM
EFLINKLAMTKTNDEFFDMMKRS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccctgccataccattcacaacattaagttcgagatttaccccgagtttaaga
acccacaccattatgaatcttaccgaattaaagaatacgccggtttctgagctgatcact
ctcggcgaaaatatggggctggaaaacctggcccgtatgcgcaaacaggacatcattttt
gccatcctgaagcagcacgcgaagagtggcgaagatatctttggcgacggtgtgctggag
attctgcaggatggatttggtttcctccgctccgcagacagctcctacctcgccggtcct
gacgacatctacgtttctcccagccaaatccgccgcttcaacctccgcaccggtgacacc
atttcaggtaagattcgcccacctaaagaaggtgaacgttactttgcactgctgaaagtc
aacgaggtgaacttcgataagccggagaatgcgcgcaacaagattctgttcgagaacctg
acgccgctgcatgcgaattcgcgtctgcgtatggaacgcggtaatggctcaaccgaagac
ttaaccgcccgcgttttggacctggcgtcacccatcggtcgcggtcagcgtggtctgatt
gttgcgccgccgaaagccggtaaaaccatgctgctgcagaatatcgcgcagagcatcgcg
tacaaccatccagactgtgtgttgatggtgttactgattgacgaacgtccggaagaagtg
accgagatgcaacgtctggtgaaaggtgaagtggttgcctccacctttgacgaaccagct
tcccgccacgtgcaggttgctgagatggttatcgaaaaagccaagcgcctggttgagcat
aagaaagacgtgatcattctgctggactccatcacccgtctggcgcgcgcttacaacacc
gtggtgccggcatccggcaaagtgttaaccggtggtgtggatgcaaacgccctgcatcgt
ccgaagcgtttcttcggtgcagcgcgtaacgtggaagagggtggtagcctgaccatcatc
gcaacggcgctgatcgataccggttcgaagatggacgaagtgatttacgaagagtttaaa
ggcaccggtaacatggagctgcatctctcccgtaaaattgctgaaaaacgcgtcttcccg
gccattgattacaaccgttccggtacgcgtaaagaagagctgctcaccactcaggaagag
ctacagaaaatgtggatcctgcgcaaaatcattcacccgatgggtgagatcgatgcgatg
gagttcctcattaacaagctggcgatgacgaagacgaatgatgagttcttcgacatgatg
aagcgctcttag
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