Endozoicomonas sp. GU-1: O2T12_00345
Help
Entry
O2T12_00345 CDS
T08918
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eng
Endozoicomonas sp. GU-1
Pathway
eng03420
Nucleotide excision repair
eng03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O2T12_00345 (uvrD)
03430 Mismatch repair
O2T12_00345 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eng03400
]
O2T12_00345 (uvrD)
Enzymes [BR:
eng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O2T12_00345 (uvrD)
DNA repair and recombination proteins [BR:
eng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O2T12_00345 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
O2T12_00345 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_22
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WBA81669
LinkDB
All DBs
Position
72478..74655
Genome browser
AA seq
725 aa
AA seq
DB search
MDVTSILDSLNDAQRSAVAAPVSSMLVLAGAGSGKTRVLVHRIAWLVQAEAMSPYSVMAV
TFTNKAAAEMRSRIEELLGIAPRGMWVGTFHGLSHRLLRAHWKETGLPENFQILDSDDQL
RVLKRIMKAMQLDEQKWPPRQAQWFINSKKDEGLRPDYIDPGYDPFERTMVDVYRRYHEY
CEQVGVVDFGELLLRAHELLLKRADILQHYRERFRYILVDEFQDTNAVQYAWLRLLAGDQ
DKLMVVGDDDQSIYGWRGARIENIRQFTHDFPNAQTIKLEQNYRSTGNILQAANAVIANN
PDRLGKELRTDGDKGEPVHLYAGFNEMDEARFITDRIKDAITKGTARSDIAILYRSNAQS
RILEEAMLRAAIPYRIYGGQRFFERAEIKNALAYLRLVRSPDDDTSLERVINIPTRGIGE
KTVEKLREAARSQGISLWQALKNLVAASAVGGKAGKSMATFVELIESLSHAGETLDLGEL
SDHVVTMSGLIDHHSKEKGEKGQARVENLEELVNACRQFDMDELFLDDEQGEETETMTPL
DAFLANAALEAGTSQADQFQDSVQMMTLHSAKGLEFPLVFLAGMEEGLFPHKMSLDEGNL
EEERRLCYVGITRAMKTLYLTYAESRRLYGSETMNRPSRFIREIPGELLQEVRLGGTITR
PVATRMAPASPDHGLSLGQRVHHNVFGEGIVINYEGDGNQARVQVNFDSEGAKWLMMAYA
NLSPI
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaacctcaatacttgattcactgaatgatgcacagcgcagtgctgttgcagct
cccgtcagctctatgctggttctggccggtgccggtagtggtaaaacccgcgtgcttgtc
caccggatcgcctggctggtgcaggctgaagccatgtccccttattcggtgatggcggta
accttcaccaacaaggccgcggcagagatgcgctcacgtattgaggaactgctgggcatc
gcccccaggggaatgtgggtgggtacgtttcatggtctttcccaccgtctgctcagggca
cactggaaggaaacagggctgcccgaaaactttcagattctggacagcgacgatcagctg
cgcgtgctcaagcggatcatgaaagccatgcagctggatgaacagaagtggccgccacgt
caggcccagtggtttatcaacagcaaaaaagatgaaggacttcgtcccgattacatcgat
cccggttacgacccattcgaacgcaccatggttgatgtttatcgacgctaccatgaatac
tgcgaacaggtgggagtggtggacttcggggagctgctgctgcgggcacacgagctgctg
ctgaagcgggccgatattctccagcattaccgtgaacgtttccgatacattctggtggat
gagtttcaggataccaacgccgtgcagtatgcctggctgcgattgctggcgggagaccag
gacaagctgatggtggtgggtgatgatgaccagtccatttatggctggcgcggtgccaga
attgagaatatacgtcagttcacccatgacttccccaatgcccagaccatcaagctggaa
cagaattaccgctctaccggcaatatcctgcaggccgccaatgccgttattgccaataac
ccggatcgtctgggaaaagagctgcgtaccgatggtgataaaggcgagccagtgcacctg
tacgctggctttaacgagatggacgaagcccgatttattactgaccggattaaagatgcc
atcaccaaaggcacggcccgcagcgatattgccatcctttaccggtccaatgcgcagtcc
cgtattcttgaagaggcgatgctccgggctgcgatcccctatcgaatctacggtgggcag
cgcttctttgaacgggcagagatcaaaaacgctctggcctatctccggcttgtccgctcg
ccggatgacgacacctctctggagcgggtgatcaatattcccacccggggtatcggtgag
aaaactgtagaaaagctcagagaggcggcccgtagtcagggtatttctctctggcaggca
ttaaagaacctggtggcagcctcagcggtgggcggtaaggcgggtaaatccatggccact
tttgtggaactgatcgagtccctgagccatgccggtgaaacactggatctgggtgagcta
tccgaccatgtggtcaccatgagcggcctgattgaccaccacagcaaagagaaaggcgag
aaaggtcaggcccgggtggaaaacctggaggaactggtgaatgcctgtcgtcagtttgat
atggacgaactgttccttgatgacgagcagggggaagaaaccgaaaccatgacgcccctg
gatgccttcctggccaatgccgcactggaagcgggcaccagtcaggccgatcagttccag
gacagcgtgcagatgatgacgcttcactctgccaaggggctggagtttccgctggtcttt
ctggccggtatggaggaggggttattcccccataaaatgtcgttggatgaaggcaacctt
gaggaagagcgtcggctttgttatgtgggtattacccgagccatgaaaaccctgtatctg
acctatgccgaaagccgacgtctgtacggcagtgaaaccatgaaccgcccttcccgtttt
attcgggagatccccggtgaactgctccaggaagtgcgccttggtggcaccattacccga
ccggtagcgactcgcatggcaccggcatcccctgaccatggtctgtcactgggccaacgc
gtccatcacaacgtgtttggtgagggaatcgtgattaattacgaaggtgatggcaaccag
gcccgggtgcaggtcaattttgattctgaaggtgctaaatggttgatgatggcttacgcc
aacctgtctccaatctaa
DBGET
integrated database retrieval system
