Endozoicomonas sp. GU-1: O2T12_00415
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Entry
O2T12_00415 CDS
T08918
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
eng
Endozoicomonas sp. GU-1
Pathway
eng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O2T12_00415 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eng03021
]
O2T12_00415 (rho)
03019 Messenger RNA biogenesis [BR:
eng03019
]
O2T12_00415 (rho)
Transcription machinery [BR:
eng03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
O2T12_00415 (rho)
Messenger RNA biogenesis [BR:
eng03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
O2T12_00415 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
Fungal_virus_P2_C
S1CSD-TOTE-2
AAA_22
NACHT
AAA_25
HAD_SAK_1
Motif
Other DBs
NCBI-ProteinID:
WBA81681
LinkDB
All DBs
Position
complement(89673..90932)
Genome browser
AA seq
419 aa
AA seq
DB search
MHLTELKKKSVPELLAIANEMGLESLARSRKQDVIFTILKRHARSGEDIYGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEIN
FDQPENARNKILFENLTPLFPQDRLTMEMGNGATEDLTARIIDLVAPIGKGQRGLIVSPP
KAGKTLMLQNIAANITRNNPECYLIVLLIDERPEEVTEMSRSVRGEVVASTFDEPPSRHV
QVAEMVLEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLTILATALVDTGSKMDEVIFEEFKGTGNMELHLDRRAAEKRVFPAIGI
NKSGTRREDLLTTEEELQRMWILRKILHPMDEIQAIEFLLDRMKHTKTNEEFFQSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttaccgaactgaagaaaaagtctgttcctgaacttctggcgatagcgaatgaa
atgggtctcgagagccttgcccgttccaggaagcaggatgtaattttcaccatactcaaa
cgccatgcacgcagtggtgaagacatctatggtgacggtgttctggaaattctccaggat
ggttttggatttctccgttccgctgatagttcctatctggcgggaccggacgatatttat
gtttccccaagtcagattcgccggtttaatctgagaacgggcgatacgatttccgggaaa
attcgtccaccgaaggagggagaaagatattttgccctcctcaaggtgaatgaaatcaat
tttgaccaaccagaaaatgcccgcaataaaatcctgtttgaaaaccttacgccattgttt
ccccaggaccgtctcactatggagatgggaaatggtgcaacagaggatttaaccgctcga
attatcgacctggtagctcccatcggcaaaggtcagcgtggcctgattgtctctcctcct
aaagcgggtaaaacactgatgctgcaaaatattgcggcaaacattacccgtaataatccg
gagtgctacctgattgttctgctgattgatgagcgcccggaagaggttaccgaaatgtcc
cgttccgtgcgcggtgaagtggtcgcctctaccttcgatgagcctccttcacgtcatgtg
caggttgccgagatggtgctggaaaaagccaagcgtctggtagagcacaagaaagacgtt
gttattctgctggattccattacccgtctggcccgtgcttacaacaccgtgattccctct
tccggcaaggtgcttacgggtggtgtggatgctcatgcccttgagcgtccgaagcgtttc
tttggtgctgcccgtaacattgaagagggtggcagcctgaccattctggcaaccgcactg
gttgataccggctccaagatggatgaggttatctttgaggaattcaagggtaccggtaac
atggaactccaccttgaccgtcgggcggctgaaaagcgggtcttccctgctattggtatc
aacaagtcaggtactcgccgtgaggatctgctgaccacggaagaagagcttcagcgtatg
tggattctgcgtaaaatcctgcacccaatggatgaaattcaggccattgaattcctgctg
gaccgtatgaagcacaccaagacgaatgaagaattcttccagtccatgaaacggaagtaa
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