Endozoicomonas sp. GU-1: O2T12_00520
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Entry
O2T12_00520 CDS
T08918
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
eng
Endozoicomonas sp. GU-1
Pathway
eng03030
DNA replication
eng03410
Base excision repair
eng03420
Nucleotide excision repair
eng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O2T12_00520 (polA)
03410 Base excision repair
O2T12_00520 (polA)
03420 Nucleotide excision repair
O2T12_00520 (polA)
03440 Homologous recombination
O2T12_00520 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eng03032
]
O2T12_00520 (polA)
03400 DNA repair and recombination proteins [BR:
eng03400
]
O2T12_00520 (polA)
Enzymes [BR:
eng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O2T12_00520 (polA)
DNA replication proteins [BR:
eng03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
O2T12_00520 (polA)
DNA repair and recombination proteins [BR:
eng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
O2T12_00520 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O2T12_00520 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WBA81699
LinkDB
All DBs
Position
complement(114225..116972)
Genome browser
AA seq
915 aa
AA seq
DB search
MSEQASTPPLILVDGSSYLYRAFHASERANLRTADGRPTGAIRVMTNMLRSLMRQYQDSH
VAVIFDARGKNFRHDLYSEYKATRKPMPDDLRSQIEPIHHIVRALGLPLLMIEGVEADDV
IGTLARQATEKKINTIISTGDKDIAQLVTEHVSLIDTMNDAYTDQQGVESKFGIPASLII
DYLALMGDSSDNIPGMPGVGQKTALALLNGIGSIDEIAGRLDEVAALGFRGSKNFAEKFT
EHKDIVLLSRQLATIKTDVELPVSIESLEMQPLDKEQLLALFKEYEFRTLIAELEKEGSV
SDGKESDEQTSGATGEYSVVTEETEFLDWIAQLESAELFAFDTETTSLDYMVAELVGVSF
AIEPGKAAYVPVAHDYLGAPAQLERNWVLEKLKPLLEDPAKQKVGQNFKYDQSVLARYDI
QIKGAAFDTMLESYCLNSIATRHNMDALAEHYLNHKTIKYEDIAGKGAKQLTFNQIELEK
AGPYAAEDADITLRLHLAIWEQLQAEPALMAVFREVEMPLVDILSRIERHGALVDGVLLK
QQSLEIGQRLKELEQAAHDVAGQAFNLSSPKQLQELLFDKLQLPVIKKTPKGQPSTAEEV
LQELALDYELPKLILEHRSLSKLKSTYTEKLPQMINGATGRIHTSYHQAVTATGRLSSSD
PNLQNIPIRTPEGRRVRQAFIAPEGYQLVAADYSQIELRIMAHLSGDKGLLDAFAHGLDI
HKATAAEVFGVALDEVTGDQRRSAKAINFGLIYGMSSFGLAKQLGVSRKSAQEYIDLYFA
RYPGVLRYMETTKNFAREKGYVETILGRRLYLPEINARNGMRRQGAERTAINAPMQGTAA
DIIKKAMIRVDEWLQASGLDARVIMQVHDELVLEVANESLEAVVEGIKVQMSSAAELSVP
LLVEAGMGDNWDEAH
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacaagccagtacgccgccactcatactcgtcgacggctcatcttacctttat
cgcgcctttcatgcttctgagcgggccaatctgcgcacggctgatggtcgaccaacgggc
gctatccgggtcatgacaaacatgttgcgcagtctgatgcgtcaatatcaggatagccat
gttgcagtcatttttgacgccaggggaaaaaacttccgccatgacctgtacagtgagtac
aaagccacccgtaaaccaatgccggacgacttgcgctcacaaatagaacccatacatcac
attgttcgtgcgcttggcctgcctctgttaatgattgaaggcgttgaggcggatgatgtg
attggaacgctggccagacaggcaaccgagaaaaagatcaacaccatcatttccacgggc
gataaggatattgcccagctggtgactgagcatgtgtcgctgattgataccatgaatgat
gcgtataccgatcaacagggtgttgaaagtaagtttggtattcctgccagcctgattatt
gactatctggcattgatgggtgatagcagcgataacatcccgggtatgccgggtgttggt
cagaaaacagcattggctctgcttaatggcatcggcagtatcgatgagattgccgggcgg
ttggatgaagtggctgcgcttggttttcgggggagcaaaaactttgctgagaagttcacc
gagcacaaggacattgtgttgttgtcccggcagctggctaccatcaagaccgatgtagag
ctgccggtttccattgaaagtctggaaatgcagccccttgataaagagcaactgttagcg
ctgtttaaagagtacgaattcaggacgttgattgccgagttggagaaagaaggctctgtt
tccgatggcaaggaatctgacgaacaaacatcaggcgctaccggtgagtattcagtggtg
actgaggagaccgagtttcttgactggatagcacagctggaatcggcagaactgtttgcg
tttgataccgaaaccaccagtctggattacatggtggctgaactggtgggtgtttcattt
gccattgagcctggcaaggcggcttatgtgcccgttgcccatgattatctgggagcacca
gcccagctggagagaaactgggtactggaaaaactcaagcctttgctggaagacccggca
aaacagaaagtaggtcagaactttaagtacgaccagagcgtgctggcccgatatgacatt
caaatcaagggggccgcttttgataccatgcttgagtcctactgtttgaactccatcgcc
acccggcacaatatggatgccctggctgagcattacctgaatcataaaaccattaaatat
gaggatattgccggcaaaggtgctaaacaactgacgtttaaccagattgagcttgagaaa
gcgggcccctatgcggcagaagatgcggatattacgctacgtctccatcttgccatctgg
gagcagttacaggctgagcctgcgttgatggcggtgttccgggaagtagaaatgccgctg
gtggatattctttcacgtattgagcgccatggtgctttggttgatggtgtcctgcttaaa
caacagagtctggagattggccagcgtctcaaggaactggagcaagcagcccacgatgtg
gcaggacaggcatttaacttatcatcacccaaacagttgcaggagcttctgtttgataag
ctgcaactgccggttatcaagaaaacgcccaaggggcagccatcaactgctgaagaggtc
ttgcaggagcttgccctggactatgaactgcccaagctgattcttgagcatcgtagttta
agcaagctcaagtccacttatacagagaaacttccgcagatgattaatggggcgacgggt
cgaatccatacctcttatcatcaggcagtcaccgccactggacgactatcctcctcggat
cctaacctgcagaatattcccattcgaacaccggaaggtcgccgggtgcgacaggcattt
attgcaccggaaggttaccagctggtggcggcagattactcccagatcgagctgagaatc
atggcgcacctctctggtgataaaggtctgctggatgcttttgcccatgggctggacatc
cacaaggcgacggcggctgaagtctttggcgtggcgcttgatgaggtaacgggtgatcag
cgacgaagtgccaaagccattaactttggtttgatctacggcatgtcgtccttcggactc
gcgaaacagctgggggtatccaggaaatcggcacaggaatatatcgatctgtactttgca
cgttatccgggtgttttaaggtacatggaaacaaccaaaaacttcgcacgggaaaagggg
tatgtggagacaatattgggtcgtcgtctgtatctgccggaaatcaatgccagaaatggt
atgcgccgtcagggtgctgagcgaacagcgatcaatgcacctatgcagggcactgctgca
gatattatcaagaaggcgatgatcagggttgatgagtggctgcaagcgtcggggcttgat
gcccgtgtcattatgcaggtccacgacgaactggtgcttgaagttgccaatgagagtctt
gaggccgttgttgaagggataaaagtgcagatgtccagtgctgccgagctcagtgttcca
ctattggttgaagccggtatgggggataactgggatgaagcccattag
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