Endozoicomonas sp. GU-1: O2T12_06485
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Entry
O2T12_06485 CDS
T08918
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
eng
Endozoicomonas sp. GU-1
Pathway
eng03030
DNA replication
eng03430
Mismatch repair
eng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O2T12_06485 (holA)
03430 Mismatch repair
O2T12_06485 (holA)
03440 Homologous recombination
O2T12_06485 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eng03032
]
O2T12_06485 (holA)
03400 DNA repair and recombination proteins [BR:
eng03400
]
O2T12_06485 (holA)
Enzymes [BR:
eng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O2T12_06485 (holA)
DNA replication proteins [BR:
eng03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
O2T12_06485 (holA)
DNA repair and recombination proteins [BR:
eng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
O2T12_06485 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WBA82771
LinkDB
All DBs
Position
complement(1515198..1516076)
Genome browser
AA seq
292 aa
AA seq
DB search
MTGGDFLSTANSLSLFAQKQILELRIPNGKPGDAGSKALLEYLSHPSPDNLLLMITDRLD
NTLQKSKWFKALEQAGVFIPIWPIESGQLPGWLAQQLKVDGYRATPDALSLIAERVEGNL
LAASQELEKLKLLARDKTIDEATVREAVSDSARYDVFQLLDSALEGNIKQCVRILGILKG
EGIEPPIILWALAREIRLLSHLSRQLSRGMARDLAIEQSAKALGFVPFMLKRRSSLLEKA
IRRSSERNLRQMLLDTGKIDRCIKGLEKGNAWDKLLTLTLNLAGLPPIPVIN
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
ttgactgggggggactttctcagcacggccaacagcctgtcgctgtttgcccagaagcag
attcttgaactgcgaatacccaatggcaagcccggagatgcaggcagtaaggcgctgctg
gaatacctcagccacccctcaccggacaatctgctactgatgatcacggatcgtctggac
aataccctgcaaaaatcaaaatggttcaaggcgctggaacaggccggagtatttattccc
atctggccaatcgaatccggacagctaccaggctggctcgctcaacagcttaaagtggat
ggctaccgggcaaccccggatgccctgagcctgattgccgagcgtgtggaagggaatctt
ctggcggcatcccaggaactggaaaagctcaagcttctggccagggacaaaaccattgat
gaagcaaccgtgcgagaagcggtgtcggacagcgcccgatatgatgtgttccaactgctg
gacagcgccctggaaggcaatatcaaacagtgtgtgcgcatcctgggcattctgaaaggt
gagggcattgagcctccgatcattctctgggctctggccagggagatacgcctgcttagc
catctgagccgacagctatcccggggcatggcaagggatctggccattgaacaatccgct
aaagcgctggggtttgtgccatttatgctcaagcgcaggtcatcactgctggaaaaggcc
attcgccggagcagcgagcgaaacctgcgtcagatgctgctggatacaggaaagattgat
cgttgtatcaaagggttagagaaaggtaacgcctgggataaactgctgaccctgaccctg
aatctggcaggtttaccccccattccggtcatcaactga
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